Dendronephthya gigantea (soft corals): 114532422
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Entry
114532422 CDS
T06112
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03013
Nucleocytoplasmic transport
dgt03015
mRNA surveillance pathway
dgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114532422
09122 Translation
03013 Nucleocytoplasmic transport
114532422
03015 mRNA surveillance pathway
114532422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114532422
03041 Spliceosome [BR:
dgt03041
]
114532422
03009 Ribosome biogenesis [BR:
dgt03009
]
114532422
03012 Translation factors [BR:
dgt03012
]
114532422
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114532422
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114532422
mRNA cycle factors
Stress granule specific factors
114532422
Spliceosome [BR:
dgt03041
]
Complex C
Other components
EJC/TREX
114532422
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
90S particles
Helicases
114532422
Translation factors [BR:
dgt03012
]
Eukaryotic type
Initiation factors
eIF-4
114532422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UTP25
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
114532422
NCBI-ProteinID:
XP_028409723
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MASRANQREQRAQKTVETDDQEDDLTKVEYETSEGVEVIPTFDGIGLREDLLRGIYAYGF
EKPSAIQQRAIKPILKGRDVIAQSQSGTGKTATFSISALQCLDTQSREPQVLVLSPTREL
ATQIQKVCLALGDYMNVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIGRRNLRT
RNIKMFILDEADEMLNKGFKEQIYDVYRYLPPATQVILISATLPHEILEMTSRFMTDPIR
ILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR
EANFTVSAMHGDMPQKEREAIMKEFRAGQSRVLISTDVWARGLDVAQVSLVINFDLPNNR
ELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtgcgaaccagcgtgaacaacgtgcacagaaaacagtggaaacagacgat
caagaagacgatttaactaaagtagaatatgaaacttcagaaggagtcgaagtgatacca
acttttgacggcatagggcttcgcgaagaccttttacgagggatttacgcatacggtttt
gaaaaaccatcagccatccaacaaagggcaatcaaaccaattctcaaaggaagagatgtg
attgcacagtcacaatccggaacaggaaaaacagcaacattttctatctctgcactgcaa
tgtctagacacacagagtcgagaaccccaagttctagttttatctccaacacgagaactt
gcaacgcaaatccagaaggtttgtttggctctgggcgactacatgaacgtccaatgtcat
gcttgtatcggtggcacaaatatcggtgaagacatcagaaagttggactatggtcaacac
attgtttctggcacgcctggaagagtttttgatatgattggccgaagaaatcttagaacg
aggaacatcaagatgttcatcctggacgaagcagatgaaatgctcaacaaaggtttcaag
gagcaaatatatgatgtctacagatatcttcccccagcaacacaggtaatactcatcagt
gccaccctacctcatgagattcttgagatgacttcgcggttcatgactgatccgattcgc
attctggtaaaacgtgatgagttgaccttagaaggaattaagcaattctttgtggctgtt
gaacgagaagaatggaaatttgacacgctatgtgatctttacgataccctaaccattaca
caagctgtcatcttctgtaatacgaagcgaaaggtcgactggttgacagagaaaatgaga
gaggcaaatttcacagtatctgccatgcatggggacatgcctcagaaagaacgcgaggca
atcatgaaggaatttcgtgcaggtcaaagccgtgttttgatatcaaccgatgtctgggct
cgaggtttagatgttgcacaagtgtctttggtcatcaactttgacctgccaaacaaccgt
gagttgtacatacacagaattggtcgctctggtagatttggtcgaaaaggtgttgcaatt
aattttgtgaagtctgatgatattcgaatccttcgcgatatcgaacagtattacagcacg
cagattgatgaaatgccaatgaacgtggcggatttgatctag
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