Dendronephthya gigantea (soft corals): 114532765
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Entry
114532765 CDS
T06112
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114532765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgt03009
]
114532765
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114532765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
WDR55
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_DCAF4
PROPPIN
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
114532765
NCBI-ProteinID:
XP_028410149
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MVRYKIHRVRFVPYMPQAIHCLAVEGKKKPRIAVSRADSSIEIWNIEDNWYLERKIPGCN
ESSVEALVWSKSRLFSSGLHGEITEWDLNRLDAKTCVDSYGGAVWSLAVNHEQTLMAAGC
EDGCVRLFDITSEEIEYARVFSKQEGRILSLCWHKDGQILVAGGSDATIRVYEVSTGHAR
LCITLDTSSQRKALVWSLVVTNNFTIISGDSSGKTQFWDGKLGTLIKSFNVHTADVLAVC
VNQQEDTVYASGVDNKLVQFRLVTDEEGSKTWSRSISTRAHTHDIRALAMIESVDQPFLV
SGGVDTNILVYSTAKYGSDPRKIPAYPLTPAIHLASQSNILMFQKTTVLHLWRLGETVDE
ESCHLEKNPSYMLQIEAKSSNHIVCSALSGDGLWTGFSDVHHVSLFMLNLEDSSSLLVQQ
AKYLPEEILPAHHMKFTQDCSKLITITMKKSLQVIHLSNDSITVETVEFPISSSAIDYKD
LDFYAPVTSLTVSSDGSLCASADTEGCVQVFDIHNTKHHNTLPRFSRQVTAMAFQPETNI
LALVTTNKEVFMFNIEKMKMTNWSKKASKNSLPQQWQGRHTKVVNILFDPYCKDIMLLQS
HDMFVLLDTTKPLPPKSIKLFETKREKFKARVGRKRRHNGSDSEQQQIEQSEAFKVCKKY
QPLLFLGVNEDKSLVIVERSWLSIMENLPPTLHRKRYGT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtgagatataaaatacacagagtacggtttgtaccttacatgccacaagctattcat
tgtttagccgttgaaggaaagaaaaagccaagaattgctgtttcaagagctgacagtagc
attgaaatatggaatattgaggataattggtatttggaaaggaaaatacctggatgtaat
gagtcatctgttgaagctctcgtctggtcaaaatctcgtttattttcatctggacttcac
ggtgagatcacggaatgggacctcaatagacttgatgcaaagacatgtgttgactcctat
ggtggagcagtgtggagccttgctgtaaaccatgaacaaacattgatggctgctggctgt
gaggatggttgtgtacggctgtttgacattacctcagaagaaattgaatatgctcgagtt
tttagcaaacaagaaggtcgcattctgtcactttgttggcataaagatggtcaaatcttg
gtggcaggtggatcagatgcgaccattagggtatatgaagtttcaacaggtcatgctagg
ctttgtattacactcgacacttcttctcaaagaaaagctctagtttggtctctggtagtg
acaaacaattttactatcatcagtggtgattcttcagggaaaacacaattctgggatggt
aaactagggacattaattaagagtttcaatgtccacacagctgatgttctggctgtgtgt
gttaatcagcaagaagacacagtgtatgcctctggtgtggacaacaaattggtgcagttt
agacttgttactgatgaggaaggaagcaaaacttggagcagatcaatttctacaagagca
cacacacatgatataagagctttagcgatgatcgaaagcgtggatcaaccatttcttgtt
tcaggaggtgttgatacaaacatcctagtgtactccacagcaaaatatggatcagatcca
aggaaaattccagcttatccattgacaccagcaatccatcttgcaagccagtctaatata
ttaatgtttcaaaagacaacagtgcttcatctctggagacttggagagacagtggatgaa
gagagttgtcatcttgagaagaatccgtcgtatatgttacaaatagaagccaagagctcc
aatcacattgtctgttctgcattgtctggtgatggtttatggacaggattctcagatgtc
catcatgtcagcctgtttatgcttaatctggaggattcaagttctttacttgttcagcag
gccaaatacttgccagaagaaatcttaccagcacatcacatgaaattcacccaagactgc
tctaaacttataacaatcacaatgaaaaagtcattacaagtgattcatctcagcaatgat
tcaataacagttgaaacagtagagtttcccatcagcagtagcgcaattgactacaaagat
ttagatttctatgctccagttacatcactaacagtcagctcagatggtagtctatgtgcc
agtgctgacacagaaggctgtgtccaagtctttgatatacacaacacaaagcatcacaac
actttgccgagattttcaagacaggtaacagccatggcttttcaacctgaaacaaatatc
ttggcgctagtgacaacaaataaagaagtgtttatgttcaacattgaaaagatgaaaatg
acaaattggtcaaagaaagcttcaaagaacagtcttccacagcagtggcaaggaaggcat
acgaaagttgtcaatattttgtttgatccttattgtaaagacatcatgttgcttcagagt
cacgatatgtttgtattgctggatacaaccaagccgttaccacctaaaagtataaaactc
tttgagacaaagcgagagaagtttaaagctcgtgttggcaggaaaagaagacacaatggt
tctgattctgaacaacagcagattgagcaatctgaggctttcaaagtatgcaagaaatat
caacccttgctgtttcttggtgtgaatgaggataaatcattggtgattgttgaaagatct
tggttatcaatcatggagaacttacccccgacgctgcaccgcaaacgatatggaacataa
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