Dendronephthya gigantea (soft corals): 114532999
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Entry
114532999 CDS
T06112
Name
(RefSeq) uncharacterized protein LOC114532999
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114532999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114532999
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114532999
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114532999
Messenger RNA biogenesis [BR:
dgt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
114532999
DNA repair and recombination proteins [BR:
dgt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
114532999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Acyltransf_2
Motif
Other DBs
NCBI-GeneID:
114532999
NCBI-ProteinID:
XP_028410376
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MFSNSKCGLFLSCLQFAIQNSLYSEFMLKPKQVICLEKVFFNSDVLAVLPTGYGKSLIFY
LLPALLFAAKNGVAKYTEHIDSIIVVVSPLNALMKDQISRLNAGIIRASVLDVRNVAAED
SEDAEDKDDGIRSDVVCDFPLNDKIKLEEGYYNIVFAHPESLVSCLYGRRLMRSIVYQKN
VCAIVVDESHCILEWGKDFRVDYGNLGALCATFSNVPVIAMTATANRYDRDCIKKSLGLK
SCVEIIGNPDRMNITYKKHFRTGPDIDSLTEILTPIAEGLKKQQMCYPLTIIYIPLKWCG
FAYKLFEFVLGCDQYYPKGGRPIPENRLFAQFHSPQTKEMKDEVLKQLTCATGSTIRVVF
ATVALGMGVDIKGIRSVVHITPPYTIQAYVQETGRAGRDGNHATAVLYYNNRDVAKNKPG
MQEDIRVYCQNRGTCLRYMLLKSMDTDERYIKPLSPKHFCCSVVVKNVIVALHRSYLRTN
INNICSAVKHNVHID
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaactctaaatgcgggcttttcctttcgtgtttgcaatttgcaatacaaaat
agtttgtatagcgaattcatgttaaagccaaaacaggtgatttgcttagaaaaggtattt
tttaattcggatgttcttgcggttttaccaactggatacggtaaatcattgattttttac
ttgcttcctgctctgttatttgcggctaagaacggtgttgccaaatacaccgaacacatt
gattctataatcgtcgtcgtgtcgcctttaaatgctctgatgaaagaccagatttcacga
ttaaatgcgggtataattcgtgcatcagtcctcgacgttaggaacgtagcagcagaagac
tctgaggatgcggaagacaaagatgatggcattagatctgatgttgtttgtgactttcct
cttaatgacaaaataaaacttgaagaaggatattataatattgtatttgcacaccctgag
tcgcttgtttcctgtttatatggacgaagattgatgcgaagcattgtgtatcaaaagaac
gtttgtgctattgttgttgatgagtcccattgcattttagaatggggtaaagatttcaga
gtggattatggaaatctgggtgccttgtgtgccacattttcaaatgtacctgtcatagcc
atgactgcaacagcaaaccgatatgatagggattgtatcaaaaaatccctgggcttaaaa
tcatgtgtggaaatcattggcaatcctgatcgcatgaacataacatacaaaaagcatttc
agaactggaccagatattgattctctcacagaaatccttactcctatagctgaaggtttg
aaaaaacagcagatgtgctatcctttgacaataatctacatccccttgaagtggtgcggg
tttgcatataaactgtttgaatttgttctgggatgtgatcaatattatcccaagggaggc
agaccaattcctgaaaacagattatttgcacagtttcattcgcctcaaactaaggagatg
aaggatgaagtcttgaagcagttgacatgtgctacaggaagcacaatcagggttgtattt
gcaacagtagccttggggatgggtgttgatatcaaaggcatcagaagtgttgtgcatatc
actccaccatacacaatacaagcgtatgttcaggaaactggaagagctgggagagatgga
aaccatgcaactgcagtcctatattacaataatcgggatgttgcaaaaaacaaaccgggg
atgcaagaagatattcgagtttattgtcaaaacagaggcacatgtctcagatatatgttg
ctgaaatcaatggacacagatgaaaggtacattaaaccactttctcccaaacacttctgt
tgtagtgttgtggtgaagaatgtgattgttgcacttcatagatcctatttaagaacaaat
ataaataacatatgtagtgctgtgaaacataatgtacatattgattaa
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