Dendronephthya gigantea (soft corals): 114533607
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Entry
114533607 CDS
T06112
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114533607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dgt03041
]
114533607
Spliceosome [BR:
dgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114533607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
ASA1
WD40_MABP1-WDR62_1st
PRP4
ANAPC4_WD40
DSE1_N
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_like
Beta-prop_IFT140_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
114533607
NCBI-ProteinID:
XP_028410964
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSDDEIDVPAVKKQRIFYGSLEETIRKLEIEHLKKSENQQQQNINVSDGQYLDLSEDKNT
ERYQQLLADFEKRKKARTVVVPTNDAEVKARLRELEQPICLFGEGPVERRDRLRKLVAEF
GDDVEKEPEPVTKQEKKDEEEQEVWYHEGPPELKVSRIWIANFSFPRANERLKKARVLQA
RPDAEKAAKTQELHKRLRALVNSCSQIGDDRPLSYCQFSPNSKMLATCSWSGLCKLWSVP
DCSLIRTLRGHNSRVGGVVFHPQATVSLEPSVPCMASCGADGDVRLWNMESETPIANIEG
HDKRVSRIAYHPSGRFLATCCFDYSWRLWDLDQLKEVLHQEGHSREVYHIAFHPDGSLTG
TCGLDARGLVWDLRTGQCVMPLDGHLQKVLAIDFAPNGYHVATGSEDQKVMIWDLRKRKA
IYTIPAHTNLISYVKFHDQYLLSGSYDCKVKVWTHPGWIPLKTLAGHEQKVSCVDISKDG
QFIASSSFDRTFKLWSTE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaaattgatgtcccagctgtaaagaaacaaaggatattttacggaagc
cttgaggaaacaataagaaaacttgagatcgagcatttgaagaaatctgaaaatcaacaa
caacaaaatatcaatgtctcagatgggcaatatttggatctatcagaagataaaaacact
gaaagatatcaacaacttttagctgattttgaaaaacgaaaaaaagctcgcacagttgtt
gtaccaacaaatgacgctgaagtaaaagcaagattgagagaacttgagcagcctatttgt
ttatttggagaaggtcctgtagaaaggcgtgacagattgagaaaacttgtcgctgaattt
ggggatgatgttgagaaggaaccagaacctgtcactaaacaggagaaaaaggatgaagaa
gaacaagaagtttggtaccatgaaggtccacctgaactgaaagtctctagaatatggatt
gcaaatttttcatttcctagggcaaatgaaaggttgaaaaaggctcgggttttacaagcg
aggccagatgctgagaaagcagcaaaaacacaagaacttcataaaaggttacgagcactt
gtaaactcctgcagtcagattggagatgatcgaccattgtcatactgtcaattttcacca
aactctaaaatgctggcaacttgctcatggagtggattatgtaaattgtggtctgtacca
gactgttcattgatcagaaccttgcgaggtcataattcaagagttggtggtgtagtattt
catcctcaggctacagtttctttagaaccatctgttccatgcatggcatcttgtggtgct
gatggtgatgtaaggttgtggaacatggaatcggaaacacccattgcaaatattgaaggt
catgacaaacgagtatctcgtattgcatatcatccgtcaggaagattccttgcgacatgt
tgttttgattattcgtggagactgtgggacttggatcaactcaaagaagtattgcatcag
gaaggtcactcgcgagaagtttaccatattgcctttcatcctgatggttcactgacagga
acatgtggcttagatgctcgtggtcttgtttgggacctaagaacgggccaatgtgtcatg
cctttagatggtcatctacaaaaagtcttggctatcgacttcgcacctaacgggtaccac
gtagctacgggcagcgaagatcagaaagtcatgatttgggacttgcgaaaaagaaaagca
atttacacaattccggcgcatacaaatctgatctcgtatgttaaatttcatgatcaatat
ttgttgtctggttcttatgactgcaaagtaaaggtctggacacatccaggttggattcct
ttaaaaactctagctggtcatgaacaaaaggtgtcgtgtgtggatatttccaaagatggt
cagttcatcgcgtccagctctttcgatagaacatttaaactttggtcaacagaatga
DBGET
integrated database retrieval system
