Dendronephthya gigantea (soft corals): 114533945
Help
Entry
114533945 CDS
T06112
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
dgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114533945
09123 Folding, sorting and degradation
03018 RNA degradation
114533945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114533945
03041 Spliceosome [BR:
dgt03041
]
114533945
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114533945
mRNA degradation factors
5'-3' decay
Lsm complex
114533945
Spliceosome [BR:
dgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114533945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114533945
NCBI-ProteinID:
XP_028411378
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKQTPSDFLKQIIGRPVVVKLNSGADYRGVLACLDSYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKARR
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaaagcaaactccaagtgactttttaaagcaaattatcggccgtcctgtggtc
gtgaaactgaatagtggtgcagattatagaggtgtcctggcttgtcttgatagttatatg
aacattgctttggaacagactgaggaatatgtgaatggacagttaaaaaacaaatatggt
gatgctttcattcgtggaaataatgtgttatacattagtacacagaaagcaagaagatag
DBGET
integrated database retrieval system
