Dendronephthya gigantea (soft corals): 114534794
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Entry
114534794 CDS
T06112
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
Organism
dgt
Dendronephthya gigantea (soft corals)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
114534794
NCBI-ProteinID:
XP_028412066
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MQKYNLAPLLSNGEKTESQKRCVSPWQLWLKLCRWYNHKMSQFFAALSEVIATHPLITIA
IAVVFLGVFVSGVAFLKTENRTEKLYVPQNSKSIKNLKKAGDYGFYRPTRRAEIIIVQSG
GNVLKEACFRDLRKLHRVVTAIPGYKEVCLPQLKTDPLASMSHCVREEPLWMFGNASNFS
NIIPTLNKFLPTNKELFLRIFGKGSYDSSGRITSAQAMRIVYHMKGVDLDEEVTSETADW
EKEFLKKMEDFDGTLECKSLVFTAARSLDDAINKSTGSDLKFITLTFVLMLTFACMMLGK
YRNPLTGHGLLAMSGITCVGFGIAAGFGLSMLSQIPFVSIAGILPFLIVGVGIDDMFIIV
DELDRAHPDQSIPKRLATVMRTVGPAITMTTMTDLVAFAIGTTSKFNAIVYFCTYAAVTI
TLAFLFLVTIFVAFMSYDCRRMNAGRRDMVPFLKAPPPRAGEPRWDEPLPQTSNKVMELW
AKFLMKTPTKIFIVFLSMGLLAVGIYGTTFVNEEFDRRDLAKDGSMFIKYLDADEDYFMA
DIRVDLIIENVNYSDPSIQRKMNDLSQIVANNKFYRPNVTSWFAELQKWYNSQNTTLLGS
LEMFLKNQSRFRKDIMFSEDNSTITVSRLYCFLKSTSSSVELRDAMTSLRDDLKDKSTLP
VFANAYVFIFIEQFISTLPETIYNLSLASGAICVVTSLFLVNPLVILLVLLGFVSLIFEL
LGLMYIWGVSLNSISMINLVMAIGFAVDYSAHVAHYFVFSAEETPEDKAIHALKNAGASV
IMGGFSTFLGMIVTAFASSAVFRIFFKMFFGIVVLGLIHGLCFLPVWLTIFCRRHVVVRP
DSCVDSSPDGLPVTKSRSTIDTQDHDIVVENPALSNGLSDNVNSDKRKSPTGMSEGLPED
VDLDVIKNPAVSEDVNSDEVKQSSGSEDLKSSQESIKKNLIKERNSVTGHESGDNFQSDL
SQDAKLNSTPRETKF
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtacaacttagctcctttgttaagcaatggcgaaaagaccgagtcccagaag
agatgcgtcagcccctggcaactctggttgaaactctgccgatggtacaatcacaagatg
tcgcagtttttcgcggcattgtccgaggttattgccacgcatccgttgataaccattgca
atagctgttgtgtttctgggtgttttcgtttccggggttgccttcttgaaaactgagaat
agaacagagaagttatacgtgcctcaaaacagcaagtcgattaagaatttgaagaaagct
ggagattacggattctatcgcccaacaagacgtgctgagattataatagttcaaagcggt
gggaatgtcttaaaagaagcttgctttcgagatctacggaagcttcaccgtgttgtgaca
gcaatcccaggttacaaagaggtttgtttaccacaacttaaaactgatcctttggcaagc
atgagccattgcgtgcgagaggagcccctttggatgtttggtaacgcctcaaatttcagc
aacattataccaacgttgaacaaatttttaccaacaaataaagaactatttctgcgaatc
tttggcaagggaagttatgacagcagcgggcgaatcacctcagcgcaagcgatgaggatc
gtgtatcatatgaaaggcgtggatctcgacgaggaagtcaccagcgaaacagccgattgg
gagaaagaattcctaaagaaaatggaagattttgatggcactttggagtgcaaatccctg
gtgttcacagcagcacggagtttagacgatgcgatcaataaaagcactggttccgatcta
aaattcatcacattgaccttcgtgttaatgctaacctttgcgtgtatgatgttgggaaaa
tatcgtaacccgctaacaggacatgggttgctcgccatgagcgggattacttgcgttggg
tttgggattgcggccgggtttggtttgtccatgctttctcaaataccttttgtaagcatc
gctgggattctacctttcctcattgttggtgttggcattgatgatatgtttataatcgtt
gacgaactggaccgagcacatcccgaccagagcatcccaaaacgtcttgccacggtcatg
cgcactgttgggccagctatcaccatgacaacgatgacggacctggttgcattcgccatt
ggaacgacgtctaaattcaatgccatagtctacttttgcacgtatgccgcggtaacaata
accttggcgtttttatttctcgtcacgatttttgtcgcttttatgtcgtacgattgtcgc
cgtatgaacgcaggtcgcagagatatggtcccctttctgaaagccccccctcctcgcgct
ggagagccacgttgggatgaacccctgccccaaacgtcaaataaagtaatggagctttgg
gcgaaattcttaatgaaaactcccacaaagatattcatcgtcttcctctcgatggggttg
cttgctgttggtatttacggtacgacattcgtgaacgaggaatttgaccgtcgagattta
gctaaagatggttcgatgtttatcaagtatttagatgctgatgaagattatttcatggct
gacatacgcgtggacctcatcatagagaatgtgaactattctgatccaagcattcagcgg
aagatgaatgatctaagtcagatcgtggcgaacaacaagttttaccgtcccaatgtgacg
tcgtggtttgcagaactgcagaaatggtataattcacaaaacaccacattattaggctcg
ctggaaatgttcttgaaaaatcagtcgcgttttaggaaagatatcatgttctcagaagac
aactcgaccataaccgtctcaagactctactgctttctcaaatcaacgtcgagctctgtg
gaactacgtgatgccatgacaagcctgcgtgatgatctcaaagataaatccaccttgccc
gtgtttgctaatgcctacgtgttcatatttatcgagcagttcatatcgacgctaccagag
accatttataatctgtccctcgcttctggcgccatttgcgttgtcactagtttgtttctt
gtcaatcctcttgtgattctgctcgtcttgttaggtttcgtctcacttatatttgaatta
ctcggtttaatgtatatttggggtgtatctttgaattcaatttcaatgatcaatcttgtt
atggcgattggttttgctgttgactacagtgctcatgttgctcattattttgtcttctct
gctgaggaaactcccgaagacaaagccattcatgccttgaaaaatgctggagcaagcgtt
attatgggaggtttcagtacctttctcggaatgatagttacggcatttgcctcatctgcg
gttttcagaatattctttaaaatgttttttggaattgttgttcttggcttgattcatgga
ctttgtttcttgcccgtgtggctgacgatcttctgtcgtcgccatgtcgttgtacgacct
gattcgtgtgttgattcaagccctgatggtcttcctgtcacgaagagtcgtagtaccata
gatacccaagatcatgacattgtcgttgaaaatccggccttgtcgaacggattgtccgat
aatgtgaattcggataaacgcaaaagccctaccgggatgtcggaaggacttcctgaagat
gtggatttagatgtcatcaaaaatcctgctgtatctgaggacgtgaattcagatgaagtg
aaacaatcatcgggctcagaagatctgaagtcatctcaggagtcgattaagaagaatctg
attaaagagagaaattctgtcactgggcacgaatctggtgacaattttcagtctgatttg
agtcaagacgccaaactcaactcaacaccacgtgaaacaaagttctga
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