Dendronephthya gigantea (soft corals): 114534850
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Entry
114534850 CDS
T06112
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03030
DNA replication
dgt03410
Base excision repair
dgt03420
Nucleotide excision repair
dgt03430
Mismatch repair
dgt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114534850
03410 Base excision repair
114534850
03420 Nucleotide excision repair
114534850
03430 Mismatch repair
114534850
03440 Homologous recombination
114534850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgt03032
]
114534850
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114534850
Enzymes [BR:
dgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114534850
DNA replication proteins [BR:
dgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
114534850
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
114534850
MMR (mismatch excision repair)
DNA polymerase delta complex
114534850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
114534850
NCBI-ProteinID:
XP_028412124
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MDRGGEKRKIDYPNSNGIKRTKSDEQKPSGFERELAKFGPTESRTSKWRRPPLPALDISK
DALIFQQLDLDHYIGQHFPGMPGSAVGPVPIVRAYGITMEGNSVLCHIHGFVPYFFIPAP
SNMKKDDCHAFKEVLNKAVIADMRSNRDNVVQAVLAVDHHTKESIYGYHENRKIPFLQIT
MSLPKLIAPAKRILESGIRYNIEPERAYTTYESNIEYEIRFMVDTGVVGCNWIELPAGKY
LMRKENQKTSRCQLEVDIAWDEFISHPCEGEWQKIAPIRILSFDIECAGRKGIFPEPERD
SVIQIANMVIRQGEKDPFIRNVFTLNTCASIIGSDVKSFKNENDLLQGWSNFLCDADPDV
ITGYNIVNFDLPYLLNRAIALKVLKFPYLGRIKEDKSTVSSTTFQSRAYGKRENKVINIT
GRVQFDLLHILLRDYKLRSYTLNSVSYHFLQEQKEDVPHSIITDLHKGTDQTRRRLAVYC
LKDALLPLRLLEKLMCVINYMEMSRVTGVPFSYLLSRGQQIKVISQLLRKAQTQDLVIPA
QRIDPGDEYTGATVIEPVKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLTEKGAKELAP
DEYIKTPCGSYFIKSTKRKGILPEILEDLLSARKKAKTDLKNETDPFRKKVLDGRQLALK
VSANSVYGFTGAQVGKLPCLEISSSVTAFGRMMIEKTKELVEEKYRIVNGYKHDAQVIYG
DTDSVMVKFGTDTVGASMELGKEAASYVTSHFIQPIKLEFEKVYFPYLLISKKRYAGLYF
TKPEIHDKMDCKGIETVRRDNAPLVASLINSCLQKILIDRDPQGAIEYTKQVISDLLCNR
IDISQLVITKELTKTGDEYSGKQAHSELAERMKKRDAGSAPKLGDRVPYVIIAGAKGMAA
YQKAEDPIYVLENNIPIDTTYYLENQLTNPLMRIFEPILGEDKAKSVLFKGEHTRTKTVV
TSTIGKLANFAKKRSTCIGCKSVLPDDRAVCNHCKPQESMFYQKEIASLNYLEEKFSRLW
TQCQECQGSLHHDVLCTSRDCPIFYMRKKTKKDLADQDKVVARFGNYSW
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtggtggagagaagagaaagatagactatccaaattcaaatggtattaaacgt
acgaaatctgacgaacagaaacccagtggattcgaacgtgaattagcgaaatttggtccc
acggaaagtcggacatcaaagtggcgtagacctcctttacccgccttggacatctcaaaa
gatgccttgatatttcaacagcttgacttagaccattatattggtcaacattttccagga
atgccagggtctgctgtaggccccgtccctattgtgcgtgcatatggcattaccatggaa
ggaaacagtgtcttgtgtcacatccatggctttgtaccatatttctttataccagcacct
tccaacatgaagaaagatgattgtcatgcatttaaagaggtgctcaataaagctgtgatt
gcagatatgaggtcaaacagagataatgttgttcaggcagtgcttgctgtcgatcatcac
acaaaggaaagcatttatggttaccatgaaaacagaaagataccatttctccagataact
atgtcattgccaaagttaattgcacctgcaaaacgaattttggaatctggcattcgatat
aacattgaacctgaaagagcttatacaacatatgaaagcaatattgaatatgagattcgt
tttatggttgatactggcgtggttggctgtaactggatcgaactaccagctggtaaatat
ctcatgaggaaagagaatcagaaaacttcaaggtgtcagttggaagttgatattgcttgg
gatgagtttattagtcacccttgtgaaggagaatggcaaaagatcgctccaattcgaatt
ctgagtttcgacattgaatgtgctgggcgcaagggaatcttcccagaaccagaaagggac
tcggtcattcagattgctaacatggttattcgtcagggtgagaaagatccattcattaga
aacgtttttaccctcaacacatgcgcgtcaataattggatcggatgtgaaatcttttaaa
aacgagaatgatttacttcagggatggtcgaacttcttgtgcgatgcggatcctgacgtc
atcactggctacaatatcgttaactttgatctaccttacttgctcaaccgcgcaattgcg
ttgaaagtgctgaaattcccatacttaggccggatcaaggaagataaaagcaccgtgtct
tcaacaacatttcagtcccgcgcctacggaaaaagggaaaacaaagttatcaatatcact
ggtcgggtacagtttgacttgctgcatattttgctccgagactataaacttcgatcctac
acattgaattcagttagttatcatttcttacaagaacaaaaagaggatgttccgcattcc
atcatcactgatttacataaaggtactgaccagactcgtcgtcggttggcagtatactgc
cttaaggatgccttattgccattacgtctactagagaagctcatgtgcgttataaactac
atggaaatgtctcgagtgacgggcgttcctttcagttacctgttatccaggggacagcag
attaaggttatttctcagcttcttaggaaggcacaaacgcaagatttggtcatccctgcc
caaaggattgatccaggtgatgaatacactggtgctactgtaatcgaacctgtaaaaggg
tactatgactccccaattgccactctggatttttcgtcattgtatccgtctatcatgatg
gctcacaacttgtgttacacaacgctgcttacagaaaaaggcgccaaagaacttgctcct
gatgaatatataaagacaccatgcggttcatattttattaaatcgacgaaaaggaaggga
atattgccagagattttggaagatctattgagtgcgagaaagaaagcaaaaacggactta
aagaacgaaacagacccttttcgcaagaaggtactcgatggtcgacagttggccctaaaa
gttagcgctaactccgtatacggcttcactggtgctcaagttggaaagctaccctgtctt
gaaatctcctcgagcgtaactgcatttgggaggatgatgattgagaagactaaggaactt
gttgaagaaaaatacagaatagtaaatggatataaacacgatgcgcaggttatatatggc
gacacggattctgttatggtaaagtttggtacagataccgttggggcaagcatggaactt
ggaaaagaagctgcttcttacgtcacctcacattttattcaacctattaaactggagttt
gaaaaggtttattttccgtaccttttgatcagcaagaaacggtatgcaggattgtacttc
acgaaacccgaaattcacgataaaatggattgcaaaggaatagaaacggttcgtcgagat
aatgctccattagttgccagccttatcaatagttgtctgcaaaaaatcctcattgataga
gaccctcaaggagcaatcgaatacacgaaacaggttatatccgacctattgtgcaacaga
atagatatatcacagttagtaattacgaaagaactaacaaagacgggagacgagtattcc
ggaaagcaagctcattcagaattggctgaaaggatgaagaaaagagatgcgggatccgcc
cctaaattaggcgatcgtgtcccatacgtcatcatcgcaggggcaaaaggaatggctgcg
taccagaaggcggaggatcctatttatgtactagaaaataatatccctatcgatacaact
tattatttggaaaaccaactgacaaatcctctgatgagaatatttgaaccaatccttggt
gaagataaagcgaagtctgtgttatttaagggagaacatacaagaacaaaaactgtcgtt
acgtcaacgattggaaagttggcgaacttcgctaagaaacgtagtacttgcattggttgt
aaatcagtgcttcccgatgaccgtgctgtgtgtaatcactgcaagccgcaggagtctatg
ttttatcagaaagaaatcgccagtttaaattacttagaagagaaattttcccgtctatgg
acgcagtgccaggaatgtcagggcagccttcatcatgacgtgttatgtacaagtcgtgat
tgtcccatattttacatgaggaagaaaaccaaaaaagatcttgccgatcaagacaaagtt
gtggcaagatttgggaattattcatggtga
DBGET
integrated database retrieval system
