Dendronephthya gigantea (soft corals): 114535868
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Entry
114535868 CDS
T06112
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114535868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114535868
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114535868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
114535868
NCBI-ProteinID:
XP_028412994
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MDFFAKEEDDVLMCSSTNFRRIEVKKLRSTADEIILFSHKEFLWRNGISFLWFICLLPAI
CILYLTLVLFSLQHPLTWITDVLLRIFSFWDIFVFVVIFGIAVTPVILLNIKICSVEIKT
GITRLSVIKSFFTVKHLSHLIFSTITASFAIHWLTSMTYHEYGVFTRNCSISYDRRISLC
LNETTLFIHCFGGVLGVVYSILYFKDKHHHIIFPVVQQERIFRVKACMVPCLWQAIRISF
KSIQIGFVLFFCFGSCANEIVQLLTGLDHDSQINRLDSFYRLFDLRFLWFCFLSGIVIPY
IWLLTNKLFGIIHTEVLRFPLQSTFTDVSDQTLPVALKCQTVPLLKYHAFNDLCQLSQFS
QKRRKQIFALSVPGGRPLNWLWISDDCLTCLNNLKERLVSYDNHNHVAYRQSGTNESLGE
NKNQYFRARNQSSVKKTPNSVKSQTTLGLTNSGNKSLRHTLAGHQLSSSLPSENTRFEIK
SKVLLSNELKQIPVIEYFLEKVDELEMERLFTDVQLQIWAAEALSRLVVASFTDDVFGVA
QKSLPFILTSLLELFQAVELYLKRPPDVEAYRKRHPAKIRRTVFVLRDSLRSSIYRITET
FKQHISNIKLSTSNKEFLVSFLEFQN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgcaaaagaagaggatgatgtgctgatgtgttcatcgacaaattttcgt
cggattgaagttaaaaaactgagatcaacggctgacgaaataatattgttttctcataaa
gaattcttatggagaaatggtatcagcttcttgtggttcatatgtcttctacctgcaatc
tgtattttgtatttgactctggttttgtttagtctgcaacatcctctcacttggatcaca
gatgttttgttgaggatattttcattttgggatatttttgtttttgttgtcatctttggc
attgctgttactcctgtgatcttgcttaatataaaaatatgctctgttgaaataaaaacg
ggtataaccaggctctctgtgatcaaatcattcttcactgttaaacatttatctcatttg
atattctcgacgattactgcctcctttgcaattcattggctcacatcgatgacatatcat
gaatatggagtatttacacgcaactgttccatttcctacgaccgtagaatctcgttgtgt
ctcaatgaaactactttgttcattcattgctttggtggtgttctgggagttgtctattca
atcttgtattttaaagacaaacatcaccatataatatttccggttgttcagcaagaaagg
attttcagagtaaaagcatgtatggttccttgtttgtggcaagctattcgcatttctttc
aagagcattcagattggctttgttttgtttttttgtttcgggtcttgtgcaaacgaaatt
gttcaactgcttactggacttgaccatgatagtcaaattaatcgtttggattctttctat
cgcctatttgaccttcgtttcctctggttctgtttcttatctggaattgtaattccttac
atctggttgttgacaaataaattgtttggaataattcatacagaggttcttagatttcca
cttcagtcaacatttactgacgtttctgatcaaactcttcctgttgcgttgaaatgccag
actgttccgttactcaagtaccatgcctttaacgatctctgtcaattgtcgcagttttca
cagaaacgaagaaaacaaatatttgctttgagtgtcccaggtggtcgacccttgaattgg
ttatggatttcagatgactgtctgacttgcctcaacaatctcaaagaacggcttgtttca
tatgacaatcataatcacgttgcgtacagacaatctggaacaaacgagtctctaggagag
aataaaaaccaatatttcagagcaagaaatcaaagttcagtgaagaaaactcccaattca
gtgaagtctcaaacaacacttggattaacaaattcaggaaacaagtcgctacggcataca
ttagctggccatcagttatcatcttcacttccatctgagaatacccgcttcgagatcaaa
agcaaggttttgctgtctaatgaattgaagcaaattccagtgatagaatattttttagag
aaggtggacgaattagaaatggaacgtttatttactgacgtacagttgcagatttgggcc
gcagaagctttatcgcgacttgtcgttgcatcgtttacggatgatgtttttggtgtcgct
caaaagtcattgccatttatactgacatcgttactggaactatttcaggcagtagagctt
tacctaaaaagacctcctgatgtggaagcatacagaaaacgacatcctgcgaagataagg
agaacggtattcgttttgagagattctttacgaagttctatatacagaataactgagact
ttcaaacaacacatcagtaacatcaaactgtcaacaagtaacaaggaatttttggtatct
ttcctggagttccagaactga
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