Dendronephthya gigantea (soft corals): 114536308
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Entry
114536308 CDS
T06112
Name
(RefSeq) exodeoxyribonuclease-like isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114536308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114536308
Enzymes [BR:
dgt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
114536308
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
114536308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3089
Motif
Other DBs
NCBI-GeneID:
114536308
NCBI-ProteinID:
XP_028413456
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MPRKRKVEEDTSKKDTKKQKVIEFRKEENREINSEEEPSTSKNPYKLPKVDKSWNMKISS
WNVNGLKAWIQKSDSLKYVRKEDPDIFCIQETKCDESSLPKEASFPGYFCYWANSETKGY
SGVGLFSKKKPSKITYGIGVSEHDKEGRVITAEYEQFFLVTSYIPNSGQGLKRLDYRQTW
DKAFRDYLKKLDNTKPVILCGDLNVAHKEIDLTNPKTNKKTAGFTKEERENFTVLLEQGY
VDTYRHFYPDRKNQYSFWSYRGNAREKNVGWRLDYFVVSERFLPKVVHSFIRDDIMGSDH
APVVILLSI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaaaacgtaaggtagaagaagatacgagcaagaaagatacaaaaaaacagaaa
gttattgaattcagaaaggaagaaaatcgagaaataaattctgaggaggaaccttcaacc
tcgaagaatccatataaattacccaaagtcgataaatcttggaatatgaaaatttcatct
tggaatgtcaatggtttgaaggcatggatacagaaaagtgactctttgaaatatgttaga
aaggaagacccagatattttttgcattcaagaaacgaaatgtgatgaatcaagtttgcct
aaggaggcaagttttccaggttatttttgttactgggctaacagtgaaacaaagggttac
agcggtgttggacttttttcaaagaagaaaccaagcaaaattacttatggaataggcgta
tcggagcatgacaaggaagggcgtgttatcacagcagagtatgaacagttctttttggtt
acatcatacattcccaattcaggtcagggattaaaaagactagactaccgtcaaacatgg
gacaaggcttttcgtgactatctaaagaagctggacaacacgaaaccagtcatactttgt
ggagatctcaatgttgctcacaaggaaatagatttgaccaatccaaaaactaataaaaaa
acagcaggttttacgaaagaagaacgcgagaacttcacagtgcttcttgaacaaggttac
gttgacacctatcgccatttttatcctgacagaaagaaccagtacagtttctggtcatac
agaggaaatgctagagaaaagaatgtaggatggcgcttggattattttgtcgtttctgaa
aggttcttgcctaaagttgtgcatagttttatacgagatgacattatgggcagcgaccac
gctccggttgttatactgttgtccatttaa
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