Dendronephthya gigantea (soft corals): 114536398
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Entry
114536398 CDS
T06112
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dgt04040
]
114536398
Ion channels [BR:
dgt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114536398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
LigT_PEase
DUF3332
Motif
Other DBs
NCBI-GeneID:
114536398
NCBI-ProteinID:
XP_028413558
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MATAPRKRKYISFPKRQKSIDYGLHGGPDDPNGTHITLHRLKSIDEKDSTDQDMRIDYGT
NTLSNSCVTPNKNDQLKLAAIYDDEPQIIRILSSLTNQEDVQRILATNDERGQPCIFYAL
ESRSKNALACLLHHIKFTECVIAENGESVLHVATKMGDIDIVRRLLEEELVAHLVDHVEG
ENGRAPLHLAAWFNHIEIAQTLVKHGAKIDRPDITGKSPIYMAACSGHADMLRDFLEHEK
DRVEDLLFSKSYGGGLYKNIFHVAVGSGDASSVQVCLEQDQEIVRRYLQEEVKHGNAHII
HAACKNGMEKCLMRIVESMGRLDTIQLNMKDNLGFAPIHKAAINDHANLVRFIGLKSRIF
LNEKTENSQTSLVLAAQRGHINVVEQLLELKADFTITDDSDRTVLHYSIEYPDILKLLLR
KKALTQLLINAKEKDGYTPIHNAALRGLCESVRILLDHGADLNVFTNTSRSPLHCAVSSQ
CLDMVELIRAKEPALINKADATGKTPLHTAASYGSAEVVRCLLNNGALIVRDGNMFTALH
IASCKGHLTIVEMLATFNKSIIDWPNKYGRTALLCAAKSCKTDVVKYLLDSNAAITEDYE
LYNCLDWSMIKNDKQSAMVMMSHDRWKEVMSTTKHGTEGTMTKLVGSMPEVAYRVLSNSM
KSVGHPESKEHLVRYTFMSLQNLESTANKTAKSEVRPLAAIKAMIRNNCYNCLCHPVCCK
YLKAKWMQFGWKIYSASLLIYIVFLISLNVYAFGIPTYKESLEKKENQNASINVKVAMVI
CIIFASFNAFKEIVQLLVYKFNYFMDKVNYLECILYISTFIFAVPNNGMIAIKSSSQWKS
CSVALFCAWLNLVMYLRRFASYGIIILMMRKISATLLKVMLLLIFFLVAFAAGFTVIMND
RDGYQRFGLSMITSAVMSLGEFELKETFLKDAFPDYKTFYWLRLAHLIAFLVVMPIIIMN
LLLALAIDDTSSIMQRAKLQKHIQTAKMIIDLERKRLSFMWKRPTPVADLEERPNKKHDF
SRTIWEFVFYGPDFSTEQSNDTPRGGTNAENLEMIVDMMKDLQRQTAILQNKVMEIQNEF
TVAKNRRSLEIIRLSQDRQHVSTQFRGFSESIEGSVPWEQSAETKRKVWVGVHREKDTHS
MSTQSPSVLDPSDIIMSAEQDVFDDEERERKEHDPELKELKELHNQLEVDENDIGAGLWG
NDDEEEGGKTEKGGANDETSERTLEDDGGQTRLLQDGNGIIV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcgccgaggaaacgtaaatacatcagctttccaaagcgtcagaagagcatt
gattatggtttacatggcggtccagatgatcccaatggaactcatatcactttacatcgc
cttaaatcaatcgatgaaaaggactccactgaccaagatatgaggatagactacggcacg
aataccctatcaaacagttgtgtgacgccgaacaaaaacgatcaactcaagttggcagcc
atctacgatgacgagcctcaaattatcagaattctcagctccctaaccaatcaagaagat
gttcaacgaatattggcaacgaacgatgaacgtggtcaaccgtgcatcttttatgctctt
gagtcccgcagcaagaatgctctggcctgtttacttcaccatatcaagttcactgaatgt
gtcatcgctgaaaacggagaaagcgttcttcacgttgctacgaagatgggagatattgat
atcgtgcgcagactgctggaagaggagcttgtcgcgcacctggtcgatcatgttgagggt
gaaaatggccgagccccgttgcatttggctgcgtggtttaatcacatcgagattgcgcag
acgctggtgaaacatggcgcgaaaatagatcgtccggacatcaccgggaagtcaccaata
tacatggcagcctgtagtggtcatgctgatatgttgcgagacttcttggaacatgaaaag
gacagagttgaagaccttcttttcagcaagtcgtacggaggaggcctttataaaaacatc
tttcacgtggcggtcgggagtggagacgcgagttctgtccaagtctgtcttgaacaagat
caggagatcgtacgaagatatttacaagaggaagtcaaacatggcaacgctcacattatt
cacgcagcgtgcaagaacggaatggagaaatgcctgatgaggatagttgaatctatgggt
cgtctggacacaatccaattgaacatgaaggataacttgggatttgctcccatccataaa
gctgctattaacgatcatgcaaatttagtaagattcattggtttaaagtcgagaatattt
ctcaacgagaagactgaaaattctcagacgtccttagtcctcgcagctcaacgcggtcat
attaatgttgtggaacagttacttgaactcaaagctgactttaccatcaccgatgatagt
gataggacggtgctgcattactccatcgaatatccagatattctgaagctactgctgagg
aaaaaggctcttacacagctgttgatcaatgcgaaagaaaaagatggctacaccccaatc
cataacgcagccttgcgaggcttatgtgaaagtgttcggatactgttggatcatggcgca
gacttaaacgtcttcacaaacacctctcgctctccacttcattgcgcagtcagctctcag
tgtttggatatggtggagttgatacgagccaaagaaccagcgttgattaataaagctgat
gcaaccgggaaaacaccgcttcatactgcagcgagctatggtagcgctgaggtggtcaga
tgtcttctcaataatggagctttgattgtgagggatggcaacatgtttactgcccttcac
attgcttcgtgtaaaggccatctaactatagttgagatgctagcgacgttcaataaaagc
attattgactggccaaacaaatatggccgaacagcattgctttgtgctgcaaagtcatgt
aagactgacgtggtgaagtatttactggacagtaatgcagcaatcacagaggattatgaa
ttatacaattgcctggattggtcgatgataaaaaatgacaaacaaagtgctatggtcatg
atgtcacatgatagatggaaagaggttatgtcgaccacgaagcatggcaccgaaggaacg
atgactaagctggttggtagcatgcctgaggtcgcttatcgtgttttatccaacagcatg
aagtctgtcggtcatcctgaaagcaaggagcatttggttcgatatactttcatgagtttg
caaaacctcgaatctactgcaaacaaaacggcaaaaagtgaagtaagaccactggcagca
atcaaagcaatgataaggaacaactgctacaattgtctctgtcatccagtctgttgtaaa
tatctcaaagccaagtggatgcaattcgggtggaagatatactcagccagtcttttgata
tatattgtgtttttaatttcattaaacgtgtacgcatttgggatccctacctataaggaa
tcgttggaaaaaaaagaaaaccagaatgcttctatcaatgtaaaggtggcgatggttatt
tgtataatttttgcaagcttcaatgcgtttaaagaaatagttcagctgctggtctacaag
tttaattatttcatggacaaagtgaattacctggagtgtatcttgtacatctctacattc
atatttgccgttccaaataatggaatgattgcaataaagagtagttctcaatggaaatcc
tgctcggtcgctttgttttgtgcatggctgaatctggttatgtatttacgaagatttgcc
tcttatggaatcattatcctcatgatgagaaagatttctgccactttactcaaggtaatg
cttttgctcatattctttctggttgcctttgcggctgggttcacggtgatcatgaacgat
agagatggatatcagagatttgggctctcgatgataaccagtgccgtgatgtctttgggt
gaatttgaattaaaggaaacgtttttaaaagatgcctttcctgactacaaaacattttac
tggctgagacttgctcatctgatcgcttttctcgttgtaatgccgatcatcatcatgaac
ttgttgttagccctggctatcgacgatacgagcagtatcatgcaaagagctaaactccag
aaacacattcagacagcgaaaatgatcatcgatttggaacgaaaacgtttaagtttcatg
tggaaaagaccgacgcctgttgctgacctggaagaacgtccaaataagaaacatgatttt
tcacggacaatttgggagtttgttttttacgggcccgatttttctaccgaacagagtaac
gatacgccccgtggcggaactaatgctgagaatttagagatgattgtggacatgatgaag
gacttgcagaggcagactgcaattttgcaaaacaaagtgatggaaatacagaatgaattt
actgtagcaaagaatcgtcgttctttagagatcataagacttagtcaagacaggcaacat
gttagcactcaatttcggggcttcagtgagagcattgaagggagtgtcccatgggagcag
agcgcagaaaccaagagaaaggtctgggtaggagtgcatagggagaaagatacgcatagc
atgagtacccagtctcccagtgtgctcgaccctagtgatatcatcatgtctgcggagcag
gatgtgtttgatgacgaggaaagagagagaaaggaacatgatcctgagttaaaggagtta
aaggaattgcacaaccagttggaagttgatgagaatgatataggggctgggttatggggg
aatgatgatgaggaggaaggtgggaaaactgaaaagggtggtgcaaatgatgaaacaagt
gagaggacattagaggatgatggaggacagacaaggttacttcaagatggcaatggtatc
attgtgtga
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