Dendronephthya gigantea (soft corals): 114536702
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Entry
114536702 CDS
T06112
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03022
Basal transcription factors
dgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114536702
09124 Replication and repair
03420 Nucleotide excision repair
114536702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114536702
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114536702
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114536702
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114536702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
114536702
NCBI-ProteinID:
XP_028413857
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAGEEVLLISEHVRYKKNNGKLMLLSDKIMWTADGADKPRLCYVYSDIKVQRISPEGSSK
MQLQTVLHDGNSYSFHFVNNAYPGAERRDRDDVKDLLAQLIPAHRKKANKDLEEKNKLLQ
NNPDLYQLYKDLVVGDIITAAEFWANRANEQTSSNETGSGDVQTIGLSSGFLSEVKPESS
GCNELRYNLDADTIAAIFKTYPAVKKKHLENVPDQMSEKEFWTKFFQSHFFHRDRQKTSS
DLFLECANKDEQEFLEQKLSNFYDRLLDISESSPLSDQGYGHKQQSSDSSDQKSKNDNLF
RRFNHQSSMVLKSYADTPSQVVNEKSTNSKDEPPIKVARLRDMVRYEDLEEETTNESVVL
KIKDKNQFCQGIAVETTQAPHKVNSYTNGTDNLTSYAERCSMDIRSWQPELVKTLSSDCA
CEVLTEFSPGGLFMRDTMSEINGHGLQTLQRELRQHYNAITELLRHFWSCFPVTSIFLEE
KLERMTKCLEKYRDIKLRNFISTLENPTYGEHLMKMIDIAVTKYQTLQEKKTKVKLK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgaggaagttctgcttatatcagaacatgtcagatataagaaaaataatggg
aaacttatgttgctttctgataaaataatgtggacagcggacggagcggataaaccacgg
ctgtgctacgtttattccgacatcaaagtgcagagaatcagccctgaaggcagctcaaaa
atgcagcttcaaacagtgcttcacgatggtaactcgtacagtttccattttgtcaataat
gcctatcctggcgctgaacgtcgagatcgtgatgacgtgaaggaccttttagctcaatta
atacctgctcataggaaaaaagcgaacaaagatttggaggagaagaataaactattgcaa
aataatcctgatctctaccagctatataaagatcttgttgttggtgacattattacagct
gcagaattttgggcaaacagagcaaatgaacagacatctagcaatgaaacagggtctggt
gatgttcaaactatcggtctgtcgtctggatttctgtcagaggtaaaaccagagagtagt
ggttgcaatgaactgagatataacttggacgctgatactattgcggcaatatttaaaaca
tacccggcagttaagaagaaacacttagaaaacgttcctgaccagatgagcgagaaggaa
ttttggaccaagttttttcagtctcatttctttcatcgtgatcgtcaaaagacttcgtcg
gatctgtttttggaatgtgcaaataaggatgaacaagaatttctggaacaaaagctttca
aatttctatgatcgtttgttggatatttcagagtcatctcctctttctgaccagggctat
ggtcataaacaacagtcttctgactcttccgatcagaaaagcaaaaacgacaacctgttt
cgtcggttcaatcatcagagctctatggtactcaagtcatacgcggacactccttcccag
gttgtgaatgaaaagtcgacgaacagcaaggatgaaccaccgataaaagtggctcgactt
cgagatatggtaagatatgaggatttggaggaggaaactacgaacgaatcagtagttttg
aaaataaaagacaaaaatcagttttgtcagggaattgcagtggaaacaacccaggcacct
cacaaggtaaattcgtataccaatggtacggataatctcacatcttatgccgaaagatgt
tctatggacatcagatcatggcaaccagagcttgtcaagactctcagcagcgattgtgct
tgcgaagttcttaccgaattctcacctggtggcctgttcatgagagatacgatgtccgaa
attaacggccatggtcttcaaacgttgcaaagagaattacggcaacattataatgcaatt
accgagttacttcggcacttttggtcttgttttcccgtcacttcaatattcttagaagaa
aagctagaacgtatgaccaaatgcttagagaaatatcgagacataaaacttcgtaatttt
atttcaactctggaaaacccaacgtatggagaacatctcatgaaaatgattgatattgcc
gtcacaaaatatcagactttgcaagaaaagaaaacaaaagtgaaattaaaatga
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