Dendronephthya gigantea (soft corals): 114536922
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Entry
114536922 CDS
T06112
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03420
Nucleotide excision repair
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114536922
09124 Replication and repair
03420 Nucleotide excision repair
114536922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dgt04121
]
114536922
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114536922
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114536922
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
114536922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
114536922
NCBI-ProteinID:
XP_028414011
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MKMKNLNIFNQIVMREVGLQNPRKLAELKKTERVCSLHLYSDKTFEDIHTGGVNSLSLSP
DINGKRYLLSTASRGTIAIHALNASVGKTCNVIAKVDQSSPYMHKLNVETVSWYPHDSGI
FLSSSVDGVIKVWDTNTLESVEDFIVQDMVYRHQMSPIATSHSLVAAACKDSRIYLADLN
SGSASHILKGHREAVLSLAWSTRDPFILASGGCDNRVLLWDILASMRCFXLDQHNGKQTS
EFAKYKTAHNGNVNAMSFTSNGLYLVTYGTDDRARLWDVSSGRNCLVNYGRIHNSCNKGI
QIAISDTNKELAFLPTSSWITAVDIHTGKHIMKLKGAYRFVNCCVYEENFQELYSGSNDT
FILAWLPKGKQVKDDETCVEYDDDLRTKHGPSVYQDTWSSDEDN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaagaatctgaacattttcaaccaaatagtgatgcgtgaagtaggtctgcag
aatccaaggaagcttgctgaacttaaaaagactgaacgagtctgttccttgcatctatat
tcagacaaaacgtttgaggatattcatactggtggagttaattcactgtcactttctcct
gacataaatggaaagagatatttgctgtctactgcatcaagaggaactattgcaattcat
gctttgaatgctagcgttgggaagacttgtaatgttattgcaaaagttgaccaaagctca
ccatacatgcataaattgaatgtcgaaacagttagttggtacccacacgactctggaata
tttctctcaagctctgtggatggagtcattaaagtgtgggacacaaataccttggaatct
gttgaagacttcatagtgcaagacatggtctatcgtcatcagatgtctccaattgctaca
tcacattctcttgttgctgcagcttgcaaagactccaggatctaccttgcagacttgaat
tccggttcagcttcacatattctcaagggacaccgagaagctgttctctcgctggcatgg
tcaaccagggatccgttcattcttgcgagcggcggctgtgataacagggttctactttgg
gatatcctggcctcgatgcgatgctttnagttagaccaacacaatggcaaacagacatct
gaatttgccaaatacaaaactgcacataatggcaatgtcaatgcaatgtcctttacatca
aatggattgtatttagtaacctatggaacagacgatcgcgccagattgtgggacgtttcg
agtggtcgaaactgcctggttaattatggtcgtatacataattcttgtaacaaagggatt
caaatagccatcagtgacacaaacaaagagttagcattccttccaacttcttcttggatt
acagcagttgatatacacactggaaaacatattatgaaattaaaaggagcttatcgtttt
gtaaattgctgtgtctatgaggagaactttcaggagttatacagtgggtcaaatgataca
ttcattttggcttggctgccaaaagggaagcaagttaaggatgatgagacctgtgttgaa
tacgatgatgatttaaggacaaaacacggccccagcgtataccaggacacttggagcagt
gacgaagataattaa
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