Dendronephthya gigantea (soft corals): 114537619
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Entry
114537619 CDS
T06112
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114537619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114537619
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114537619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Rad17
AAA_22
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
114537619
NCBI-ProteinID:
XP_028414491
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAGQTSQEVLDVPYEQTFLTYLGSLPEKSETTIRVFDRTEYYTVHGSDATFIAKEIFKTM
NVVRQIGSGGKKVPSVALSKVRFESTIRELLLVRQYRVELYRNKGGKGTLQSWFLAGKAS
PGNLQQFEEILFGNNEMSASVGVMAFKLAADAGQKTVGVAYVDIAERKIAVCEIVDNDHF
SNVEAMLVQLGPKECIVQANDQSPDAGNLREVIQRSGIMVTEKKKGDFSTVDVVQDLNRL
LKINSGNSSTLPEVDLNHAMSCVAVIIKYLEILSDDSNFGRFHISTIDLNQYMKLDAAAV
RALSLLPSSADGANKSVSLLGLLNKCRTPQGKRLLGQWIKQPLLDEKKIEERLNVVETFF
NNVVLRQTVQEELKKFPDFSRMAKKFQKNRATLQDCVRVYQAVGRLQELVISLDECQDNH
RPLINELFVAPLQELKDDFSKYVELVETTIDLDQIENHEFLIRPSFDEGLQECRENMDQV
QRKIPRQLDKAANELGLEAGKTIKLETNSQFGYYFRVTRKEEKKLRGNKKFTTLDTRKDG
VRFTSSVLRQLNDEFQALKATYDDVQSKLANEVIKIASGYCEPMQILSDSLAKLDVLISF
SHVAASAPIPYCRPKIFPAEHGSVILSAVRHPCLEVQDEIAFIPNDVTLNRDEQSFLIIT
GPNMGGKSTYIRSISVAVLMAQIGCFVPCEAAEISIKDAILARVGSADSQLKGVSTFMSE
MLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEFISTRIKALCLFATHFHELT
ALADAVPSVKNYHVTAMTTGDTLTLLYRIKKGVCDQSFGIHVAELTNFPRKVIEFAKRKA
EELEDFQGQTAEDNNDSNENQAILSSKKRRMDKKEGDNLIQEFLQNVASIPIDNLSDDQV
STKVLDLKNALLEKNNSYINDMLTRNT
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcaaacatcacaagaagttctagatgtgccttacgagcaaacattcttgacc
tatttgggttcgttgcccgagaaatcagaaacaacaattcgtgtttttgacaggactgaa
tactatactgtccatggatctgatgcgacattcatcgccaaggaaatttttaaaactatg
aacgttgtcagacaaattggatcaggaggcaaaaaagttccatcagttgcactgagtaaa
gtgaggtttgaatcaacaatcagagaactgttgttggtacgacagtacagagttgaactt
tatagaaacaaaggagggaaaggaacattgcagagctggtttctggctggcaaggcttct
cctggaaatttacaacaatttgaagaaatcttgtttggtaataatgaaatgtctgcttcg
gtcggtgtgatggcattcaaacttgctgctgatgctggccaaaagactgttggtgtagcc
tatgttgatattgctgaacgaaagattgctgtctgtgagatagtcgacaatgatcacttc
tcaaatgttgaggcaatgttagtccagttgggaccaaaagagtgcatcgttcaggcaaac
gaccaaagcccagacgctgggaacttgagggaggttatacaacgaagtgggataatggtt
actgaaaagaagaaaggcgacttttcaacggtcgatgttgttcaagatcttaacagactt
ctgaaaatcaattcaggaaatagctcaacgcttcctgaagttgatttgaatcacgcaatg
tcttgtgttgccgtcattattaaatatttggagattttatcagatgactcgaactttggt
cgttttcatatctcaaccattgatctgaatcaatacatgaagcttgacgctgctgccgtc
cgtgctttgagtcttctgccatcttccgctgatggtgccaataaatctgtgagtttactt
ggtttgttgaacaaatgcagaacaccccaggggaagcgattattaggacaatggatcaaa
caacctcttctagacgagaaaaaaattgaggaaagactaaatgttgttgaaacgttcttt
aataacgttgtgcttcgtcaaacagttcaggaagagttgaagaaatttcctgacttttca
aggatggctaaaaagtttcaaaaaaatcgagcaacactccaggattgcgtaagagtttac
caggccgtgggaaggttacaagagctggtgattagtctagatgaatgtcaagacaaccac
cgaccgctgatcaacgaactgttcgttgcaccattacaggaattaaaagatgatttctca
aagtacgttgaattagttgagacaacgattgatctcgatcagatcgaaaatcacgaattc
ctgatcagaccatcttttgatgaaggtctacaagaatgccgagaaaacatggaccaagtt
caaagaaaaattcctcgccagctggacaaagccgcaaatgaacttggtctcgaagctgga
aaaactatcaaactggaaaccaacagccagtttggatattattttcgggtgactagaaag
gaagagaaaaaactacggggaaataagaaattcacaactctggacacaaggaaagatggc
gtcaggtttacgagctcggtgttaagacaactaaatgatgagtttcaagcgttgaaagcc
acgtacgatgacgttcaaagtaaacttgcgaacgaagtgatcaaaatagcaagtggctac
tgtgaaccaatgcaaattcttagtgattctttggcaaaacttgatgtgttaataagtttc
tctcacgtggctgcctctgctccaataccatactgtaggccgaagatctttcccgcagaa
catggctcggtcatactatccgccgtcagacacccttgtcttgaggtgcaggatgaaatt
gcattcattcctaatgatgtaaccctgaacagagacgagcaatcattccttataatcact
ggtccgaacatgggcgggaaatcaacatatatacgttctataagtgtggccgtgttgatg
gctcaaattggatgttttgttccctgtgaggcggctgagatctccatcaaggatgccata
ttggctcgtgtgggttctgctgacagtcagttgaagggagtttcaacgttcatgtcagag
atgttagaaacagcgtcaattcttcggagtgccaccgaaaattctttaatcatcatcgat
gaactgggacggggcacctcaacttacgatggatttggtttagcttgggctatttcagag
ttcatatcaacgcgtattaaggcgctctgtttgtttgcgacacatttccacgagcttacg
gctttagcagatgccgttcctagtgtcaagaattaccatgttacagcaatgacaactgga
gacactcttacattattgtacagaatcaaaaaaggtgtttgcgatcaaagttttggtatt
cacgttgcagagttgacgaattttccacgtaaagttatcgagtttgcaaagagaaaggct
gaggaactagaggattttcagggtcaaaccgcagaggataataatgacagtaacgaaaat
caagcaattctttcatctaagaaacgtcgcatggacaaaaaggaaggagacaatctaatc
caagaatttcttcaaaatgttgcaagcattcccattgataatctctcagacgaccaggtt
tctacaaaggttttagatctgaagaacgctcttcttgaaaaaaataacagctatatcaac
gacatgcttacaagaaacacttaa
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