Dendronephthya gigantea (soft corals): 114537685
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Entry
114537685 CDS
T06112
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03082
ATP-dependent chromatin remodeling
dgt03083
Polycomb repressive complex
dgt04330
Notch signaling pathway
dgt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114537685
03083 Polycomb repressive complex
114537685
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114537685
04350 TGF-beta signaling pathway
114537685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dgt03036
]
114537685
Enzymes [BR:
dgt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114537685
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114537685
HDAC complexes
Sin3A-HDAC complex
114537685
BRAF-HDAC complex
114537685
REST complex
114537685
SHIP complex
114537685
MiDAC complex
114537685
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114537685
Heterochromatin formation proteins
Other heterochromatin formation proteins
114537685
Chromatin remodeling factors
NuRD complex
114537685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114537685
NCBI-ProteinID:
XP_028414588
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MTILLEVTSFEQKEQGNSMANVYPAGKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNL
LLNYGLYRKMEIYRPHKANLDEMTKYHSDDYVKFLKTIRPDNMSEYTKQMQRFNVGEDCP
VFDGLFEFCQLSTGGSIAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAIL
ELLRYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDIRDIGAGKGKY
YAVNFPLRDGIDDESYEEIFKPIITKVMEIYQPNAVVLQCGADSLAGDRLGCFNLSLKGH
AQCVSFVKKFNIPLLMLGGGGYTIRNVARCWTYETSVALDLDIANELPYNDYFEYFGPDF
KLHISPSNMPNSNQQEYLDRTKERLFENLRMIPHAPGVQMQRIPDDHAIGNDSEAEDEEE
DRKPDKRISIMASDKEIARPEEYSDSEDEAEEGGERRHANSHKEDEPTAKRPKVAEKTGE
AEDVKLKTEPKSSSAPTSKTSSPKPAASPKATDPKSPEKPSNPEQNNETNGEKVDSSSAP
VTENQNKPEETSTDEIQPNAQDAKKQPGSTDEAAVTTNNTEVEKSAEPPVAPPEAPPENP
PAEPASAQPPTSDAAPPAEQPMEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaccattttattggaagttaccagctttgaacagaaagaacaaggcaacagcatggcg
aacgtgtatccggccggtaaaaaaagagtttgttattattacgatggcgatgttggtaac
tattattatggccagggtcatcctatgaaacctcatcgcattcgaatgacccataatcta
ctcctcaactatggattgtacagaaaaatggaaatttatagacctcacaaagcgaaccta
gatgaaatgacaaaatatcattccgatgactatgtgaaatttttgaaaacaattcgtccg
gacaacatgtcggagtatacaaaacagatgcaaagattcaatgtgggtgaagattgccct
gtgtttgatgggttatttgaattttgccaactctcaactggtggatcaattgctggggct
gtgaaactgaataaacagcaaacggacatcgccatcaactgggctggtggcctgcatcat
gcgaagaaatctgaggcatccggcttttgttacgtaaatgacattgttctagcaatcctt
gaactgctgaggtaccatcagcgagtcttgtatgtggacattgatattcaccacggtgat
ggggtggaagaggcgttctacacaactgatagagtgatgactgtttcatttcataaatac
ggagaatattttcctggaacaggagacatacgtgatattggtgcaggcaaaggcaaatat
tatgctgtcaactttccactacgtgatggcattgatgatgaatcttatgaagaaatattc
aagccaattattacaaaagtcatggagatttatcaaccaaatgctgttgttcttcaatgt
ggggcggattccttggctggtgacagattaggatgttttaacctctcattaaaaggtcat
gcacaatgtgtttcatttgtgaagaagtttaatatcccactgctaatgctgggaggaggt
ggttataccattcgcaatgttgccagatgttggacatacgagacttcggttgcactggat
cttgatattgctaatgagctaccatataatgattactttgagtactttggtccagacttc
aaacttcacatcagcccatcaaacatgccaaattcaaaccaacaggaatatttagacaga
accaaggaaaggctttttgagaacttgcgtatgattccacacgctccaggagtccagatg
caacgtatacctgatgatcacgctataggaaatgatagcgaggctgaggatgaagaggaa
gatcgcaaacctgataagagaatcagcattatggcatcggacaaagagatcgctagaccc
gaggaatactcggactccgaagatgaggcggaggaaggcggagaacgacgacatgccaac
tcgcataaagaagacgagccgacagccaagcgaccaaaagtcgccgaaaaaaccggcgaa
gcagaagacgttaaattgaagacggagccgaaatcatcaagtgcaccaacatcaaagacc
agctcgccaaaaccagccgcctcaccgaaggctaccgacccgaagtcgccagaaaaaccc
tcaaatccggaacaaaataacgagactaatggcgaaaaagtggactcgagctctgcacct
gtgaccgaaaatcaaaataaacccgaggaaacgagcaccgacgagattcaaccaaacgcc
caagacgcgaaaaaacaacccggatccacagacgaagccgcggtaaccacgaacaacaca
gaagttgaaaagtctgccgaaccaccagtcgcaccgcccgaggcccctcccgaaaatccg
cctgccgaacctgctagtgcccagcctcctacgtcggacgccgctccccccgccgaacag
ccaatggaattttag
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