Dendronephthya gigantea (soft corals): 114540975
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Entry
114540975 CDS
T06112
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114540975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114540975
Enzymes [BR:
dgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114540975
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114540975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114540975
NCBI-ProteinID:
XP_028416762
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MVKEQFRETDVARRVSHLEFGIFSPSHMQKNAQIQCVSKNLYMPENARKPAGYGVLDPQL
GISNKDRSCTTCGKQLADCVGHFGFIDLELPVFHVGYFKATIAILQCVCKSCSRVLLTPD
DRISTLESLRRPALSNLARKGILKKVNTKCRKLSQCPYCESLNGNVKKVGMMKIVHEKYK
TTKKILHPVISEFHASFQNALEHNKELEPLLKKAQEILNPLRVLTIFKDVPDEDCPLIGM
LPSISRPEDLILTRIVVPPVCIRPSVVSDLKAGSNEDDVTMKLTEIIFLNDVLRKHRSGG
AKVQMIIEDWDFLQLQCALYINSETTGIPLSMQPKKPTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDQVAVPIHVAKILTYPEKVTKANIDFMKTLVENGATAHPGANF
VIQKDTNIKKFLKYGNRKFIAKDLKLGDTVERHMIDGDIVLFNRQPSLHKLSIMSHFAVV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALTLMGVKSNLVTPRNGEPLIA
AIQDFITGAYLLTQKDVFLDRSHMTQLCAAMLAGKDIDMRINLPPPAIFKPVKLWTGKQV
FSVLLKSHREASVKMNLRVKGKQYSSGEELCKNDSFVVVHNSELMCGALDKAVLGSGSKN
NVFYVLLRDFGQQFAADAMWKVARVCPFFLSNRGFSIGIGDVTPGHGLLKAKDELLSHGY
TKCDEFIQDFKENRLQTQPGCSEEETLEAVILRELSVIRDHAGKACLRELHKSNSPLTMA
VCGSKGSFINISQMIACVGQQALSGKRTPNGFENRSLPHFRKFAKFPGAKGFVKNSFYSG
LTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLSIQYDMTVRNSVGEIVQFV
YGGDSLDPASMEGKDRPVDFDRILAHVQSSLPDQESCVLSAAEIKDQTASVLNEEKYQTC
SDEYRRGLRKFTDKLSDKVADLHSRYSFPETMQSKPEKGRLGLAVEWVSRCTSLQLRKFI
DICHEKFMKAKIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIIN
ASRSISTPIISAGLVNESDPDEARIVKGRLEKTTLGEVTEYVEEVFAPDSCVLFIKLDLN
RIKLLKLEVNAETIVFSICTAPKLKVKRQHIHILSPCIICVYPQENSKSALHFVMQTLKK
SLPNVVIKGMKGVTRAIIHIDEEKSKPGQEKYKLLVEGNDLRGVMATVGVKGTATSSNNT
IEVERVLGIESARVTIINEIVYTMTNHGMSIDARHVMLLADLMSFKGEILGITRFGLAKM
KESVLMLASFEKTADHLFDASFHGRKDSIDGVSECIIMGIPMTIGTGMFSLLHKSNIDTS
PPQRPLLFDNPEFHIPGCEPR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagttcagagaaacagacgtcgcgcggagagtaagccatctggagttt
ggaattttctcaccatctcacatgcaaaaaaatgcacagatccaatgcgtcagtaagaac
ctgtacatgccagagaatgcaaggaaaccagcagggtacggggtgctggatccacaactg
ggtatcagcaacaaggatcgatcttgtacaacctgcgggaaacagcttgccgactgtgtt
ggtcactttggatttattgatcttgaattgcctgtctttcatgtgggatattttaaggca
acaatagccattcttcaatgtgtttgcaagagttgcagtagagttttgctgacaccagat
gacaggatttcaacgttggaatctcttcgccgtcctgcgcttagtaatctcgcacgcaaa
ggaatactgaagaaagtcaatacaaaatgtcgcaagttgtcgcaatgcccgtactgtgag
agtcttaacggaaatgtaaagaaagtaggaatgatgaaaattgttcatgagaaatataaa
acgacaaagaagattttgcatccggtgatctcagagtttcatgcctcatttcaaaatgct
cttgaacataataaagaactggaaccattattaaaaaaagctcaggaaatcttaaatcca
ttgagagttttaacaattttcaaagatgttcctgatgaggattgtccattgattggaatg
ttacccagtatttcccgaccggaagatcttattctcactagaattgttgttcccccagtt
tgcatcagaccatctgttgtcagcgatcttaaggcaggcagcaatgaagatgatgttacc
atgaaactgacagagattatatttcttaatgatgtccttcgcaaacaccgttcaggcggt
gccaaagttcaaatgattattgaagattgggattttctacagctgcaatgtgctttgtac
ataaacagcgaaacaactgggattcctttgagcatgcagcctaaaaaacccacaagaggc
ttcgtgcaaagactaaagggaaagcaaggacgttttcgtggaaacctttcaggaaaacga
gtcgatttttccggaagaactgtcatctcaccggatccaaatctaagaatcgatcaggtc
gccgtgccaatccacgttgcaaaaatcctcacgtacccagagaaggttacgaaggcaaat
atagatttcatgaagacactggtcgagaatggagcgactgcccaccccggagcaaacttt
gtcattcaaaaggatacgaacattaaaaagttccttaaatatggaaacagaaagtttatc
gccaaagatttgaagttaggggatactgtggaacgtcatatgattgatggtgatattgtg
ttgtttaaccgacaaccgtcgctgcacaaactcagcattatgagtcattttgcggtggta
aagcctcacagaacctttcgtttcaacgagtgtgtttgcactccttacaacgctgatttc
gacggcgatgaaatgaatttacatttacctcagacagaagaagctagagccgaggctctc
actctgatgggggtgaagtcaaatctcgtcaccccgaggaacggggagcccctgattgct
gcgatacaagattttatcacaggtgcctatctgcttacacaaaaagacgtattcttagac
agaagtcatatgacacagttgtgtgcggccatgttggcgggcaaagacattgatatgagg
ataaatcttcccccacctgctatttttaagcctgttaagctgtggacgggcaaacaagtg
ttcagtgttttgttaaaatctcaccgggaagcttcagtcaagatgaatttgcgggtgaaa
ggaaaacagtacagcagtggagaggagttgtgcaagaatgactcctttgtcgtggtccat
aacagcgagttaatgtgtggtgcactagacaaggcagttttgggatctggttctaagaac
aacgttttttatgttctcctgcgcgactttggccaacagtttgccgccgatgcgatgtgg
aaagtggctcgtgtctgtcctttcttcctctcaaacagaggcttttcaatcggtattggc
gacgtcacacctggtcatggtttgctaaaggcgaaggacgagctgttaagtcatggttac
acgaagtgcgacgagtttattcaggattttaaagaaaacagattgcagactcaacctggt
tgctcagaagaagaaacactagaggctgttatccttcgtgaattgtctgtgattcgagac
cacgctggaaaggcctgtcttcgagagctccacaagtccaatagccccttaacaatggct
gtctgtggatcaaaaggatccttcatcaacatatcacaaatgattgcttgcgttggacaa
caggctctgtcaggaaaacgtactccgaacggcttcgagaatcgatccttgcctcatttt
cgaaaattcgccaagtttccaggtgcaaaaggctttgtgaagaacagtttttattctggg
ctgactccaacagagtttttctttcacactatggccggacgtgaaggcttagttgatacg
gcagtaaaaacagccgaaactggttacatgcaaagacgtcttgttaagtcattggaagat
ttatcgatccagtatgatatgactgttcgaaattccgtcggggagattgtccagtttgtt
tatggcggggatagtctggaccctgcttcgatggagggaaaggatagacccgtcgatttt
gaccgtatcttggcgcatgtccagtcatccctgcccgatcaagaatcgtgtgtattatca
gccgcggagattaaagatcagaccgcttctgttttgaacgaggaaaaatatcaaacttgc
agcgatgaatacaggaggggattgaggaaatttacggacaagttgagcgataaagtggct
gatttacactctcgttatagttttccggagacaatgcaatccaaacctgaaaaaggaaga
cttggtttggctgtggagtgggtgtcaagatgcacctcacttcagttgcgaaaatttatc
gacatttgtcacgaaaagtttatgaaagcgaaaattgagcccggcacagcggtcggcgcc
gtgtgcgcgcagagcatcggagagcctggtacccagatgaccttaaagacttttcatttc
gctggagtggcctctatgaatattaccctgggagtccctcgtatcaaggagatcatcaac
gcatcacgttctatcagtacgccaatcatatcggcgggtctcgtcaacgagtcggacccg
gacgaggcgcgcatcgttaaggggagactggagaagaccacgctgggagaggtgacagag
tatgtggaagaagttttcgctcctgacagctgtgttttatttataaagttagacttgaat
cgaataaagcttttgaagcttgaggttaatgcagagacaatcgtgttttccatttgcacg
gcgccaaagctcaaagtgaaacgtcagcatattcacattttgagtccgtgtatcatttgc
gtttatccacaagaaaacagcaagagtgccttgcattttgtcatgcaaacgctgaagaaa
tctttacctaatgttgttatcaagggaatgaaaggcgtgacgcgtgctattattcacatc
gacgaagagaaatcgaagcctggtcaggagaaatataaattattggttgaaggaaatgat
ttgcgaggtgtcatggcaaccgtgggtgtgaagggaacagcgacatcttcaaacaacaca
attgaggtcgagcgtgttctcggtattgagtctgcgcgagtaacgattattaatgaaatc
gtctacacgatgacgaatcacggtatgagtatcgacgcccgccatgtcatgctgttagcg
gacttgatgtcttttaagggcgaaatccttggcataacaagatttggtttggcaaaaatg
aaagaaagcgtacttatgctagcctcgtttgagaaaactgctgaccatctattcgatgcc
tcgttccacggaagaaaggactccattgatggagtcagcgaatgcattataatgggaatt
cctatgacaatcggcacggggatgttttcccttcttcacaaatcgaacattgatacctca
ccaccacagcgacctctgctgtttgataaccctgaatttcacatccctggctgcgagcca
aggtga
DBGET
integrated database retrieval system
