Dendronephthya gigantea (soft corals): 114541205
Help
Entry
114541205 CDS
T06112
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04120
Ubiquitin mediated proteolysis
dgt04137
Mitophagy - animal
dgt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114541205
04120 Ubiquitin mediated proteolysis
114541205
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114541205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dgt04131
]
114541205
04121 Ubiquitin system [BR:
dgt04121
]
114541205
03029 Mitochondrial biogenesis [BR:
dgt03029
]
114541205
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
114541205
Membrane trafficking [BR:
dgt04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
114541205
Aggrephagy
Other aggrephagy associated proteins
114541205
Xenophagy
Other xenophagy associated proteins
114541205
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
114541205
Mitochondrial biogenesis [BR:
dgt03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
114541205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
IBR_2
IBR_1
Rad60-SLD
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
114541205
NCBI-ProteinID:
XP_028416982
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSHDVTVNFNGKSFNLRSQPSWTIAQLKHEIARKKNVKTAGIKIIFAGRELPDELTLGNA
EMNHSVIHAVQKSGQISVDATYNANDGLTKVKLTQDDEDEDGESEQSGKQSFFFVYCKTC
KKLTRGKLRCRCSNCKEGSFVLSQGPNGWDDVLIKGRMQGQCESNTNCQGKTAEFYFKCG
EHHGRDEQAPLSMLKSNIRNIPCITCSEISDVILVFPCESKHTICEDCFREYCVTYLSER
RFVQTERKGYTIACPGNSDDCRAAFISDPHHFRLLGDEQYERFQTFAAEECVLLAGGVLC
PGRGCGQGIFPPQGRRRVTCEHGCGLVFCRNCSRPYHEGECQSSEATAGASASGNTAANR
FQVTEANNQRARWNEQSEAHIKKSTKRCPNTKCNVPVEKNAGCNHMTCSRCGFHWCWICR
VPWDRKCQRNHWFNH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgacgtgaccgtaaacttcaacggcaaatcatttaaccttcgttctcaacca
tcctggacaatcgctcaactaaaacacgaaattgctcgcaagaaaaatgtcaaaactgct
ggaattaaaatcatttttgccggtcgagaattacccgatgaattaacactcgggaatgca
gagatgaaccacagcgtcattcatgctgttcagaaatctggtcagatctcagttgatgca
acttacaatgcgaatgatggtttgacgaaagtgaaactgacacaggatgacgaagatgaa
gatggtgaatctgaacaatcaggcaagcaaagtttcttctttgtttattgtaaaacttgc
aagaaactaacacgaggaaaattgcgatgtcgatgttcaaattgcaaggaaggaagcttt
gttctatcacagggtccaaatggttgggacgatgtattgatcaaaggccgcatgcaggga
caatgtgaatccaatacaaactgtcagggaaaaacagctgaattttatttcaaatgtggg
gaacatcatggaagagatgaacaggcgccgttatcaatgttgaaatctaacatcagaaat
attccctgcatcacatgctctgaaatatcggatgttattttagtttttccttgtgaaagc
aagcatacgatttgtgaggattgttttcgcgagtattgcgttacatatttgagcgagaga
cgatttgttcaaacagaacgaaagggatacactatcgcctgcccaggaaattcagatgat
tgtcgcgcggcctttatcagtgatccacatcacttccggttgcttggcgatgaacagtat
gaacgtttccagacatttgccgccgaggaatgtgtccttttagccggtggggtactttgc
ccaggtcggggatgtggacagggtatatttcccccacaagggcgccgtcgagtaacgtgt
gaacatgggtgtgggcttgtgttttgtcgaaattgttcacggccctaccatgaaggagaa
tgtcaatcaagtgaggctaccgctggagcatctgcttctggaaacacagcagcaaacagg
tttcaggtcactgaagcgaataatcaacgagcaagatggaacgaacaatctgaagcccat
ataaaaaagagcactaaaagatgtcccaataccaagtgcaatgttccagtcgagaagaac
gcgggttgcaatcatatgacatgctcaagatgtggatttcactggtgctggatttgtcgt
gttccttgggacaggaaatgtcagagaaaccattggttcaatcattga
DBGET
integrated database retrieval system
