Dendronephthya gigantea (soft corals): 114541661
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Entry
114541661 CDS
T06112
Name
(RefSeq) focadhesin-like
KO
K27498
focadhesin
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114541661
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114541661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
DnaGprimase_HBD
Motif
Other DBs
NCBI-GeneID:
114541661
NCBI-ProteinID:
XP_028417258
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MVLRGLCDLFSLVPSSVVDSKQYENFKENVLLFLWRYSEHENEDISDASYKALSKFETKD
FLIRHLPKQTRQTVTQRLLLTPKIKKMMEECLQNEKEMDIETLPIPAYFYVELLQRKVIF
PGCYQGLEEFLKSIVAQEISNLPRGVEHSKMKAVQASENKSMSSIPEQLKKQYDKCKQPS
LKSSIAVSLLYSYEIHAEKRSGKPIRSQVVNNIKLYRQLINQLVQDVPVKSSDWRSNIEI
SHAWILFMNRVFDSYVQGRRAELELQNERGQIDEKAYNEGLKNASSWTRDALTDLLKAAS
KGSQIMHCNSLLALAALANAVFVRTSDDVTTNQELLANYKREGCISAEEWIACVADTLIV
TLDRKLKTVGVPLSWGKQVSSTTLLAQAAAAIALAQITPCLIDAEFERFKQVLEVLQTRM
SEQAKADSQTVVQTHCCIALGSIVQKLYDTNISDSLGQEGDILVATTFDALRKEALSSES
NNTEGAIYGLGLAMSSLSYDTDVLVNDRAKSSYSKMVECFNNERVKRDQDCKKLQELGIA
LACCTVSRFATDCLEVESVLKTFDMIKEVTETFPESVDLASAFGMLLCNLKGCGIIDNSQ
VVREWTAHWKAIASDKSLSLNSRIAAIFGLSFLFNQTQTSNSAGITPEDGVKILKQLLNI
QGDYNLSGTVFKNLGKLYYASKNRLCNQPNVPDTLDYLGEDSVLNWLIQLMISLGKEVTK
ESEEVLNVILQVLTYGPKETLPPVDWNGIITPLIKMYTGKSTTLHFLELALCSTPSPATA
RFLPSWLTQSVYLSFSTDCQVRLFSCLPQLLNILSAKKLTNILDIAAKYFSNDEVDTRIA
EAILDGLCSVMHMPEPPKSLCIKETIEKIYNYFPVDLKMLVPKLVACVQCLESHKIESLT
APTEESFAKSIMFRRRIILENPSMLKKLFKPCIDFTLSSMDVKYDAMMSLVSTISCVELR
SDSRLSTEWILQFLAELSSTKSETKTVLLLLTTFTLAISGYDNGIFQIILALQQDNLFQN
HQAWFALIKNLFPYSFAFLLAQPQWKGRLEETIQKLLATCKDLDIKESSLLLDFLLEMRN
FDVYEKHSVWSQVVCCM
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgcgtggcctgtgtgatttgttttctctcgtaccgtcatcggttgttgattca
aagcaatatgagaatttcaaagaaaacgtattgttgtttctctggagatattcagagcat
gagaatgaagacatatcagatgcatcgtacaaagctttgtcaaaatttgaaactaaagat
tttttaataagacaccttccaaagcagactcgtcagacagttacccagcgtcttctctta
acaccaaagattaagaaaatgatggaagagtgtttacaaaatgagaaagaaatggacatc
gaaactctaccgattcctgcatatttttatgtagagctcttgcagagaaaagtaatcttc
cctggttgttatcaaggtttggaagagtttttgaaaagcattgtagcccaggaaatctca
aaccttccacgaggcgtggaacatagcaagatgaaagcagttcaagctagcgaaaacaaa
tcaatgtcctctattcccgaacaactgaaaaaacaatacgacaaatgcaaacaaccatct
ctaaagtcctcaattgcagtatctttgttgtattcttatgaaattcatgccgagaagaga
tccggtaaaccaataagaagtcaagttgtaaacaatattaaattatatcgtcaactgatt
aatcagttggttcaagatgttcctgtcaagtcttctgattggcggtcaaatattgaaatt
tctcatgcttggattttgtttatgaatcgagtttttgattcttatgttcagggacggaga
gccgagttagaactacagaatgaacgcggacaaattgacgagaaggcatataacgaaggc
ttgaagaatgcgtcgtcctggaccagagatgcattaacagatcttctcaaggctgcatca
aaaggtagccaaattatgcattgcaattccttgttagcattggctgctttggcaaatgct
gtcttcgttcgcacaagcgatgatgtcacgactaatcaggaattgctggcaaactacaag
cgtgaaggttgtattagcgccgaggagtggattgcgtgtgtcgctgacacattgatagtt
acacttgacagaaaattaaaaacagttggggttccactgtcttggggaaagcaggtttca
tccacaacattgttagctcaagctgcagctgccattgcattggctcaaatcacaccatgc
ctaattgatgctgaatttgagcgtttcaaacaagtgcttgaagtattgcagacgagaatg
tcagaacaggcaaaggcagacagtcaaactgttgtacaaacacattgttgcatagcgttg
ggaagtattgtacaaaaattatatgacacaaatatcagtgattctttgggacaggaggga
gatatactagttgcaacaacctttgatgctttaagaaaagaagccttatccagtgaatca
aacaacacagagggagcgatatacggtcttggtttggcaatgtcttcactaagttacgat
actgacgttttggtaaatgaccgcgctaaatcgtcgtactccaagatggtggaatgcttt
aacaacgaacgtgtcaaacgtgatcaggattgtaagaaattacaggaacttggaattgct
ttagcatgttgtactgtgagccgttttgctacagattgcctggaggttgaatctgtactg
aagacatttgatatgattaaggaagtcacagaaacatttccagagagcgttgatttagcc
tcagcatttggaatgctgctttgcaacttaaaaggctgtggtatcatcgataattctcaa
gtcgttcgggagtggacggcacactggaaggcgattgcctcggacaagtcgctttcgttg
aactctcgcattgcagcaatttttggactttcattcctctttaatcagacacagacaagc
aattctgcggggattacgcctgaagacggagttaaaattctaaaacagctgctcaatatc
cagggtgactacaatttaagcggaactgttttcaagaacctcgggaaattatactatgcc
agcaagaatcggttatgcaatcaaccaaatgttccggatacattggactaccttggagag
gactctgtgttaaactggttaattcagctcatgatcagtttggggaaagaagtaaccaaa
gagtcggaagaagtactcaatgtaatacttcaggtgctaacttacggtccaaaagaaacc
ttgcctcctgtagactggaacggaatcataactcctttgataaaaatgtatacaggaaag
agtacaaccctccattttttggaacttgcattatgttcaacaccatcgccagccacagca
cgttttcttccaagttggctgacgcaatcggtttacttatctttttctactgattgtcaa
gttcgactattttcctgtttgcctcaacttttgaatattctttctgcgaagaaattaaca
aatattttggatattgcggcgaaatatttttctaacgacgaggtcgacacaagaatagct
gaagcaatcctggatggtctctgttctgtaatgcatatgcccgagcctccaaaatccctt
tgtattaaagagaccatagagaagatatacaattattttccggtagatttgaagatgctt
gtaccgaaactagtagcttgtgttcaatgtttagaatctcataaaatcgagagtttgacg
gcaccaacagaggagagttttgcgaagagcattatgtttagaagaagaataatcctggaa
aatccatcaatgttgaagaaattatttaagccttgtattgattttactctctcttcaatg
gatgtaaaatacgatgcaatgatgtctcttgtttcgacaatatcttgtgtggaattaagg
agtgacagcaggctttcaacggaatggatcttgcaattcttggcagaactttcgtctaca
aaaagtgaaactaagacagttttacttcttctaactacgttcacactggcaatatctgga
tacgacaatggcatttttcagataattcttgcacttcaacaggacaacctgttccagaat
catcaagcatggtttgctttgatcaaaaatctgtttccgtatagttttgcattcctgctt
gcacagccgcaatggaaaggacgtcttgaagagacaatccaaaaactgctggcgacgtgc
aaggatcttgatataaaagagtcctctcttttgctagatttcttgctcgaaatgcggaat
tttgatgtttatgagaaacactcagtttggagtcaagtggtttgttgcatgtaa
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integrated database retrieval system