Dendronephthya gigantea (soft corals): 114544199
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Entry
114544199 CDS
T06112
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03022
Basal transcription factors
dgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114544199
09124 Replication and repair
03420 Nucleotide excision repair
114544199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114544199
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114544199
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114544199
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114544199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
114544199
NCBI-ProteinID:
XP_028418702
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAGEEVLLISEHVRYKKNNGKLMLLSDKIMWTADGADKPRLCYVYSDIKVQRISPEGSSK
MQLQTVLHDGNSYSFHFVNNAYPGAERRDRDDVKDLLAQLIPAHRKKANKDLEEKNKLLQ
NNPDLYQLYKDLVVGDIITAAEFWANRANEQTSSNETGSGDVQTIGLSSGFLSEVKPESS
GCNELRYNLDADTIAAIFKTYPAVKKKHLENVPDQMSEKEFWTKFFQSHFFHRDRQKTSS
DLFLECANKDEQEFLEQKLSNFYDRLLDISEESPLSDQGYGHKQQSSDSSDQKSKNDNLF
RRFNHQSSMVLKSYADTPSQVVNEKSTNSMDEPPIKVARLRDMVRYEDLEEETTNESVAL
KIKDKNQFCQGIAVETTQAPHKVNSYTNGTDNLTSYAERCSMDIRSWQPELVKTLSSDCA
CEVLTEFSPGGLFMRDTMSEINGHGLQTLQRELRQHYNAITELLRHFWSCFPVTSIFLEE
KLERMTKCLEKYRDIKLRNFISTLENPTYGEHLMKMIDIAVTKYQTLQEKKTKVKLK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgaggaagttctgcttatatcagaacatgtgagatataagaaaaataatggg
aaacttatgttgctttctgataaaataatgtggacagcggacggagcggataaaccacgg
ctgtgctacgtttattccgatatcaaagtgcagagaatcagcccggaaggcagctcaaaa
atgcagcttcaaacagtgcttcacgatggcaactcgtacagtttccattttgtcaataat
gcctatcctggcgctgaacgtcgagatcgtgatgacgtgaaggatcttttagctcaatta
atacctgctcataggaaaaaagcaaacaaagatttggaggagaaaaataaactattgcaa
aacaatcctgatctctaccagctatataaagatcttgttgttggtgacattattacagcc
gcggagttttgggcaaacagagcaaatgaacagacatctagcaatgaaacagggtctggt
gatgttcaaactatcggtctgtcgtctggatttctgtcagaggtgaaaccagagagtagt
ggttgcaatgaactgagatataacttggacgctgatactattgcggcaatatttaaaaca
tacccggcagttaagaagaaacacttggaaaacgttcctgaccagatgagcgagaaggaa
ttttggaccaagttttttcagtctcatttctttcatcgtgatcgtcaaaagacttcgtcg
gatctgtttttggaatgtgcaaataaggatgaacaagaatttctggaacaaaagctctca
aatttctatgatcgtttgttggatatttcagaggaatctcctctttctgaccagggctat
ggtcataaacaacagtcttctgactcttccgatcagaaaagcaaaaacgacaacctgttt
cgtcggttcaatcatcagagctctatggtactcaagtcatacgcggacactccttcccag
gttgtaaatgaaaagtcgacgaacagcatggatgaaccaccgataaaagtggctcgactt
cgagacatggtaagatatgaggatttggaggaggaaactacgaacgaatcagtagctttg
aaaataaaagacaaaaatcagttttgtcagggaattgcagtggaaacaacacaggcacct
cacaaggtaaactcgtataccaatggtacagataatctcacatcttatgccgaaagatgt
tccatggacatcagatcatggcaaccagagcttgtcaagactctcagcagcgactgtgct
tgcgaagttcttaccgaattctcacctggtggcctgttcatgagagatacaatgtccgaa
attaacggccatggtctccaaacgttgcaaagagaactacggcaacattataatgcaatt
accgagttacttcggcacttttggtcttgttttcccgtcacttcaatattcttagaagaa
aagctagaacgtatgaccaaatgcttagagaaatatcgagacataaaacttcgtaatttt
atttcaactctggaaaacccaacgtatggagaacatctcatgaaaatgattgatattgct
gtcacaaaatatcagactttgcaagaaaagaaaacaaaagtgaaattaaaatga
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