Debaryomyces hansenii: DEHA2B11902g
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Entry
DEHA2B11902g CDS
T01026
Name
(RefSeq) DEHA2B11902p
KO
K12597
protein AIR1/2
Organism
dha
Debaryomyces hansenii
Pathway
dha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHA2B11902g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2B11902g
03016 Transfer RNA biogenesis [BR:
dha03016
]
DEHA2B11902g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
DEHA2B11902g
Transfer RNA biogenesis [BR:
dha03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
DEHA2B11902g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
2913421
NCBI-ProteinID:
XP_457471
UniProt:
Q6BWE8
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Position
B:complement(933317..934597)
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AA seq
426 aa
AA seq
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MSKILPFVEDTQPSVGEHEKSATPSMTSILHENISSQNPSAAETKENTPNNNNGGNNRKE
GVTSLSFDQVNDNADELIELRGEGRYFGVTDPSSGTTINSLQSMGPLCANCHKRGHIRAK
CKTVVCHKCGVVGDHYETQCPTTMVCSRCGLKGHVAIKCKNKLKKRQYCKHCDTFNHGDD
MCPSIWRSYLTLPTPKSDDENDKYESTVLPVVYCYNCGDDEHYGDECPEPRTSRIPCVNG
SAFSGTNLPRHLRSLYFDRINSTKPNTQKKLQNAKPTYTNNYANNSNNSNYGNKGSYNNG
SYRNNFTNYNDYNYNSNSNFNRQPIDNNFNGYYNNNNNNINSHIHFKPNSRHPAKSDKPN
PSRSGVIPSSNSKKNNKKPTRSGFIDKNKNKVSKPNSSHKPTRSGLIESSGNRAKKQGVK
NIKNLY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatactaccgtttgtcgaggatacccaaccgctggtaggagaacacgagaaa
tcggctactccaagcatgacgtcgatacttcatgaaaacatctcatcgcaaaatccatca
gcagccgaaacgaaggaaaatacgccaaataacaataatggtggaaataatagaaaggaa
ggggtgacgtctctttcatttgaccaggttaatgataatgcggacgaattaatagaactc
cgtggtgagggaagatattttggggtcaccgatccaagttctggtacaaccatcaactcg
ttgcagagcatgggcccattatgtgcaaattgccataaaagaggccatataagggctaaa
tgtaagacagttgtgtgccataaatgtggggttgtgggcgatcattatgaaactcaatgc
ccaactacaatggtatgctcgagatgcggattgaagggccatgttgccatcaagtgtaag
aataagctcaaaaagagacagtattgtaaacattgcgatacgttcaaccatggagacgat
atgtgtcctagcatttggaggtcatatttaacattacccacacctaaaagtgacgatgag
aatgacaaatacgaaagcacagtgttgccagtggtgtactgttataattgtggcgacgat
gaacattacggggatgaatgcccagaacctagaacttcaaggataccgtgtgtaaacggc
agtgccttcagtggaactaatttgcccagacatttaagatcgctttattttgatcgcatc
aactccactaaaccgaacacccagaagaaactacaaaacgctaaacccacctacaccaac
aactatgccaacaacagcaacaacagtaattatggaaacaagggcagctataataatggt
tcgtataggaataacttcaccaattataacgattacaactacaattcaaactcaaatttc
aacagacagcctatagataacaacttcaacggctattacaacaacaacaacaacaacatt
aatagtcatatacatttcaagccaaattctagacatcctgccaagtcggataagcctaat
ccgtccagatcaggggttatacccagttcaaattcaaagaaaaacaataaaaaacctaca
agatcaggttttatagacaaaaataaaaacaaggtcagtaaaccgaactcgctgcataaa
cccacaagatcaggattaatagaaagtagtgggaatagggccaagaaacaaggtgtaaag
aatataaagaatttgtattag
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