Debaryomyces hansenii: DEHA2C06798g
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Entry
DEHA2C06798g CDS
T01026
Name
(RefSeq) DEHA2C06798p
KO
K12879
THO complex subunit 2
Organism
dha
Debaryomyces hansenii
Pathway
dha03013
Nucleocytoplasmic transport
dha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2C06798g
09122 Translation
03013 Nucleocytoplasmic transport
DEHA2C06798g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2C06798g
03041 Spliceosome [BR:
dha03041
]
DEHA2C06798g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DEHA2C06798g
Spliceosome [BR:
dha03041
]
Complex C
Other components
EJC/TREX
DEHA2C06798g
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DEHA2C06798g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
SGSH_C
Motif
Other DBs
NCBI-GeneID:
8998329
NCBI-ProteinID:
XP_002770182
UniProt:
B5RT85
LinkDB
All DBs
Position
C:597425..602170
Genome browser
AA seq
1581 aa
AA seq
DB search
MSTESEALMYFDDKVINEFEGVGSESLIQLLQAPDQTSQDTENVTSQIFTELLLVYEEEK
ITLEAIIQFLSLAIKDEFIAVIFCQVFDVFPLSVSLQKLLLEIHQRQNIIKASTFSKMIG
HESISKSSIVPTDTLMKQLNTHKRDEFYTQKKYNLIHEESEGYAKLMVEIYNILKYSDTS
YQVDYALRIIEELTGHYNLDPNRTLDILIELYSNNFVGNQDFAIDLLRKSQWWPSEESDC
FSSMENLSQGGNETAAKIIGLRISKQPLDKDLPETLKILFACLIKEGFVSFGSIYKYVTP
GDEEMKALEADYKKQLNEKIFKASASALALASPLQEDEEDEHTSKDKKPSSQGNPKQKVG
TLQSKLNSNLRFQLLRVFLGNGLYWPSIYILTEYPFLAYVDDEINELINRLFSSMLAPLY
GSIKVFSDEELDRLQTSKQVAFSRPFNNVRYEESPCTELLSFKPTIKSFTHKRFHYFYTN
WNKKIPQINNPDDLFKISKEFLKFNGVNLAKDLELFSKICEIGVWDLNKNQDNESRKHEW
LHYFRNFIFPAMPLIEENSIIIDKAYSILSFYDSEDRFNLYSEMHQVLAKNNPLIKIAYG
KAEKSTKDVLKRLSKENVRPMMRRLAKISFSNPLPCFLTILQQIESYDNLNTLVVETARY
FNNYGWDTLTLAILMRLTASGRSNIQDDGLNERQWIQSLASFIGKICHRYPNAIDLKTLI
TFLLKSLHNKENVGLIVLREIFICMGGIQTIADLTLRQIDMINCGSSLEKVVYRTIDDLR
FERFKSGHILVKTLVELDAVNELLILLCQLGDDMLFNSDQSHLKVLANKSDDLSTVLHLF
TQLINFFGNSEDLAELLLPVSEFTTKYHVPPSFAFEIWRQTISKRILAATDSDDIFNPVL
SDIMSQSSQTLSSKAWDYLSTGLYATFWQLSLYDINYTEELYDAELEKLKSNINSIKDTL
LINKRNSEVSRISIDKYKKDLKQNEDFVSVIPEENESHLKHYELISKRLTKESSHWFTMG
GTENIKSQVQSFFQYCLLPRAIHSSFDAAYSAKFLFQLHKMEATNFSIIIALNELIKSNI
LFGTLFTSTPAEAENLGLFFAELLKRLHAWSNESTFNAEAKNSTLFSEADTTQELTYDIF
RKLLFEYHDIILKDVGKALEVKEYMCRRNAITFLKYLVGIYPNVEDHCEKIVTYLENIAL
NEEREDLKLSSSALIGHVKSRSKYWVPLWEFIPMDDEEKEAHVQKRNAIKENIKKLEQES
KDRIKEKELKEKLMREKELSEKKNHTSTISYDESKSTSSRPGTRTSDSAKTRYDYYSKYG
ENKVKSQPKDETSTGAQKVAKVENEVAEKSKQDDKKENSKQLDLKARIREAKKELKESHK
SNSTPVSKEASPASSNESINSKDQTKGSIPARKPNAPSALNAPNTPNTPNAPNAPNAPKA
QSNSRLTEENRSKSRTPLPPQDIAAQKDTQNDSRYNEKNQQFGGRRYNENYNSNRYNQRS
YTQNNQQNRLQQKRPIPPPPSRGPSRPIPPPPPPPAGLKLTNDHQHRHDNQGGRNNGRYD
TKRKHDTYNSSGRGYDKKPRY
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaatcagaagctttgatgtactttgacgataaagtaatcaatgaattcgaa
ggggttggaagtgaaagtttaatacaattattgcaagctcccgatcaaacaagccaagat
actgaaaatgtcacatcacaaattttcacagagcttctattagtgtacgaagaagaaaag
ataacgttagaagccatcatacaatttttgtctttggcaattaaagatgaattcatagct
gtaatattttgtcaagtgttcgacgttttcccgttgtcagtttctttgcaaaagctttta
ttggaaattcatcagcgccagaatataattaaagcgtcaacattttcaaaaatgataggt
catgaatcgatactgaaactgtctattgttcctacggatacattgatgaagcaattaaac
acacacaagagagacgaattctatacgcagaagaaatataatttaatccatgaagaatca
gaaggatatgccaaattgatggtagaaatttataatattttgaaatacagcgacacttcg
tatcaagttgactatgccctccgtataattgaggaattgactgggcattataatttggat
ccgaaccgtactcttgatattttgattgaattatatagtaataactttgttgggaatcaa
gactttgctatagatttattaagaaaatcccaatggtggccttcagaagagagcgattgt
ttttcatccatggagaacctttctcaaggtggtaatgaaactgctgctaagattattggc
ttgagaattctgaaacagccattagacaaagacttacctgaaacccttaaaattttgttt
gcttgcttaattaaggaaggttttgtaagttttggatcgatttataaatatgtaacccct
ggcgatgaagaaatgaaagctttggaggccgattataaaaaacagttgaacgaaaagatt
ttcaaggcaagtgctagtgcactcgcattagcatctccattacaagaagacgaggaagat
gaacatacatctaaagacaaaaagccatcatcccaaggtaatccaaaacaaaaggtgggc
actttgcagtcaaaattaaactctaatcttagattccagttactacgtgtgtttttaggt
aacggtttatattggccttcgatttatattttgactgaatacccttttttggcatatgtt
gacgacgaaataaatgaattaataaaccgtttattcagctcgatgctagcaccattatat
ggttctataaaggtgttttctgacgaagaattggataggttacaaacgtcaaagcaagtt
gctttttcaagaccatttaacaatgttcgttatgaagagtctccctgtacagaattattg
agctttaagcccactattaagagttttacccacaagcgctttcattacttctatacaaac
tggaataagaaaatacctcaaatcaacaatcctgatgatttgtttaaaatctcaaaagaa
ttccttaaatttaacggtgtaaacttagctaaggatttagaattgttttctaaaatatgt
gaaataggggtttgggatttaaataaaaatcaagacaatgaaagtaggaaacatgaatgg
cttcattattttagaaactttatttttccagctatgccattgatagaagaaaactcaatt
ataattgataaggcttactccattttatcgttttatgattctgaagatcgttttaattta
tacagtgaaatgcatcaagtattagcgaaaaataatccattgataaaaattgcgtatggc
aaggcagagaaatccacaaaagatgttctaaagaggttgtccaaggagaatgtacgtcct
atgatgagaagactagccaaaatcagtttttctaacccgttgccttgtttcttaactatt
ttacaacaaattgaaagttatgataacttaaataccttggttgtcgagactgcaagatat
tttaataattatgggtgggatacgttgacattggcaattttgatgagacttactgcttca
gggagatcaaatatacaagatgatgggttgaatgaacgtcaatggattcaatcattggca
tcttttattggtaagatttgtcatcgctatcctaatgcaatagatttaaaaacattgata
acattcttattgaaatctcttcataataaagaaaacgttgggttaattgttttgagagag
atatttatatgtatgggaggtatccaaacaattgcggatttaacgttacgtcagattgat
atgattaactgtggatcatcattagagaaggtagtctatagaacaatcgatgatttacgg
ttcgagaggttcaaatctggtcatatattagttaaaactctcgtggaacttgatgctgtt
aatgaactattaattttgctctgccaattaggtgatgatatgttgtttaattctgatcaa
tctcatttgaaagtcttagcaaataagagtgacgatttaagtacagtcttgcatctattt
acgcaactaatcaatttcttcggaaatagtgaagatttggcagaattattattaccggtt
tcagaatttacaacgaagtaccatgtgccgccgtcatttgcatttgaaatttggagacag
actatcagtaagaggattttagcagctacagattctgatgatattttcaatcctgtattg
agtgatattatgagtcaaagctctcaaaccctatcttcaaaagcctgggattatttatca
actggcttgtatgcaacattctggcaattatccctttatgatatcaattatacagaagaa
ttgtatgatgctgaattagagaagttaaaatcgaatataaacagtatcaaggatactctt
ttaattaataaaagaaatagcgaggtctcaagaatatcaatagataagtataagaaggat
ttaaaacaaaatgaggattttgtttcagtcattccagaggaaaacgagagtcacttgaag
cattatgaattaatttccaaaagattaactaaggagtcatcacattggttcacaatgggt
ggtactgaaaatattaagctgcaagttcaatcatttttccaatattgtcttcttccaaga
gcaattcactcatcatttgatgcagcgtattcagcgaagtttttatttcagttgcataag
atggaagctactaatttttctattattattgctctaaatgaactaattaaaagcaatatt
ttatttggtacattatttacatctactcctgccgaggcagaaaatcttggtttgtttttt
gcagaattactaaagaggttgcatgcatggtcaaacgaaagcacgttcaatgctgaagca
aaaaattccacgttgttttcagaagcagacactactcaagaactaacgtacgacatcttt
cgtaaattattgtttgaataccacgatattattttgaaagatgttggcaaagcattggaa
gttaaagaatatatgtgtcgtcgtaatgcaattactttcttgaaatatcttgttggtatt
taccctaacgtagaggatcattgtgaaaaaattgtaacttaccttgagaatattgccttg
aatgaggagagagaggacttaaaattatcatcaagcgcattaattggacatgtaaaatcg
agatcaaaatattgggtgcctttgtgggaatttatccctatggacgacgaagaaaaagaa
gcacatgttcaaaagcgaaatgcaataaaagaaaatattaagaaattagagcaagaaagt
aaggatagaatcaaagagaaggagcttaaggagaagcttatgagagagaaagaactctca
gaaaaaaaaaatcatacaagtacaatcagctatgatgaatcaaagtcaacatcatcaaga
cctggtacgagaacttctgattctgctaaaacaagatacgattattactcgaagtacgga
gaaaataaagtgaagagccaaccaaaggatgagacttctacgggagcacaaaaggtagcc
aaggtagagaatgaagtcgcagaaaaatcgaagcaagatgacaagaaggaaaattccaaa
caattagatttgaaggcgcgaatcagagaagcaaagaaggaattaaaggagtcgcacaaa
tctaattcaacgccagtatcgaaagaggcttctccagcttcatccaatgaaagcattaac
agcaaagatcaaacaaaaggaagcataccagcaagaaaaccgaatgcacctagcgcactt
aacgcacctaacacacctaacacacctaacgcacctaacgcaccgaacgcgccgaaagct
caactgaattccagactaactgaagagaacagatctaaactgcgtactcctcttccacca
caagatatagctgctcaaaaggatacgcagaatgattccagatataatgaaaaaaatcaa
caatttggaggtagaagatacaatgaaaactataattcgaatagatataatcaaagatca
tatactcaaaataatcaacaaaataggttgcaacagaagagacctattccaccacctcca
tctagaggaccctcaagacctattcctcccccacctccaccgccagctggtctcaaacta
accaatgatcatcaacatagacatgataatcaggggggcagaaataatggtagatatgat
accaagagaaaacatgatacgtataacagcagtggaagaggctacgataagaaaccaaga
tactaa
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integrated database retrieval system
