Debaryomyces hansenii: DEHA2D07304g
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Entry
DEHA2D07304g CDS
T01026
Name
(RefSeq) DEHA2D07304p
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dha
Debaryomyces hansenii
Pathway
dha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DEHA2D07304g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2D07304g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
DEHA2D07304g
U7-dependent histone pre-mRNA processing factors
DEHA2D07304g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
8998485
NCBI-ProteinID:
XP_002770276
UniProt:
B5RTE7
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Position
D:complement(599762..602641)
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AA seq
959 aa
AA seq
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MFTFSIITPSTDDYSCKASLLSFDNDIKILADPSWNGNNHNDILYMEQYLKEVDIILLSH
STPEFISGFVLLCIKFPNLMSNIPIYSTLPVNQLGRVSTVEYYRANGVLGPLNNSILEVD
EVDEWFDKIIPLKFFQTLSVFDNRLVITPYNAGHTLGGTFWLITRRLEKIIYAPSWNHSK
DSFLNSASFLSSSSGNPLSQLMRPTVLITNTDLGSTMSHKKRTEKFLNLVDATLANGGAV
LLPTSLSGRFLELLHLIDQHLQSAPIPVYFLSYSGTKVLSYASNLLEWMSSQLVKEWEEA
SSVNNNSSNKNNFPFDPSKVDLLSDPSELVQLSGPKIVFCSGIDLKNGDMSSEALQYLCQ
DEKTTIVLTEKTHFGLDNTINSQLYHDWYNLTKQKQGGTVEDGVAVPLEKVISLENWNRE
EPLIGAELTDFQEKINLQRKQKLLAKVRDRKNQNLLNADTINGDDSSSDEEDDVVSSDDE
AAALKYTEAPANADASTTTNVPAVVKVDELSAHEAFITDHVKQTLEANRPLDLKITHKLK
PRQAMFPYIVGSHKQKFDDYGEVIDIKDFQKQEDTSSNKLIMESKRKFEQNEKRKWGNVD
NKGKGRGKNSDKDNNNQNKITPQELLNNQLLQKNLDTLFSPRKRIPLNAASSFSSKPQEL
RMRCGLSFVDLSGLVDMRSLSLIVSSLKPYNLLLLPDFSVNQNTIEEMNGLAAVKQMFDQ
QQDQHQQEQNKKSLANSSRYLSLATIRGGISNFVTSKNSAGKSAIVAVQCNTPVKIGGDD
SDDTGIGLSNFEIKLDDSIIDSLKWQNIDGSYRVAQVYGELEIHNQDLPNKKQKTISDYM
NSSTQFTLKHISNQDFLKQQQALVDAHAATTGQLLNNNGPKLAIGNIRLPELKKKLISRN
MNAEFKSEGTLVVNNSLAIRKVTYSNVEGEDTGDIVIDGAMGPLYYEIKDCIREMLAYV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgttttctataataacaccgagcacagatgattattcatgtaaggcatcgctc
ttgtcttttgataatgatataaagattttggctgatccgagctggaatggtaataatcat
aatgacattttatacatggaacaatacctaaaggaagttgacataatactcttatctcat
tctacacctgaatttataagtggatttgtcttgttatgtataaagtttcctaatttgatg
tccaatattcctatctattctacattgccggtaaatcagttgggacgagtttctacagtt
gaatattatagggctaacggtgttttgggaccattgaataatagcatattagaagttgat
gaggtagacgaatggtttgataagattataccgttaaagttttttcaaacattgagtgta
tttgataatagattggttatcactccatacaatgctgggcacactttaggtggtacgttc
tggttaataacgagaagactagaaaaaatcatatatgctccatcgtggaaccattctaag
gattcatttttgaatagtgctagtttcttgtcgtcgtcgagtgggaatccattatcacaa
ttgatgagaccaacagtattaattacaaataccgatttaggatctaccatgtctcataag
aaacggactgaaaaattccttaatttggttgatgctacattggctaatggtggggcagta
ttattgcctacatctctttcgggtaggtttttggaattattacatttaatagatcagcat
ttacaaagtgcacccatacctgtctatttcttatcatattctgggactaaggttctaagc
tacgcgtcaaatttattagaatggatgtcatcgcaattagtaaaggaatgggaggaagca
tcttctgtgaataataatagttcgaataagaacaattttccattcgatccttctaaagtc
gatttattgctggaccctagtgagctcgttcaactaagtggaccaaaaattgtcttctgt
tccggtattgatttaaaaaatggtgatatgtcgtcggaggcattacaatacttatgtcag
gatgagaaaacaaccatcgtgttgacagaaaaaacgcattttgggttagataatacaatt
aactcccaattatatcatgattggtacaatctcacgaagcaaaaacaaggaggcaccgtt
gaagatggggtcgctgttccgttagaaaaggttattagcttggaaaattggaatagggaa
gaacctttaataggtgcagaacttacggattttcaggaaaagataaatttacagagaaaa
caaaagttacttgctaaggtaagagatagaaagaatcaaaatttattaaatgcagatacg
ataaatggtgatgattcgtcgtcggatgaagaggacgatgttgtctcatctgacgatgaa
gctgcggcattaaaatatactgaagctcctgctaatgcggatgcttccaccacaacgaac
gtgcccgctgttgttaaggttgacgagctttcagctcatgaggcatttataacagatcac
gtcaagcaaactcttgaagcaaatcgtccactagacctcaagattacgcataaattgaag
cctagacaagctatgtttccttatatagttggttctcataaacaaaaatttgatgattat
ggtgaagtaatcgacatcaaagatttccaaaagcaagaggacactagtagtaacaaatta
atcatggaaagtaaacggaaattcgaacaaaacgaaaagcgtaaatggggtaatgtcgat
aataagggtaaagggcgtggtaaaaactcggataaagataacaataaccaaaataaaatc
acaccgcaggaactcctaaataatcaattgttacagaaaaaccttgatacattatttagc
cctcgaaagagaattccactcaatgcggcatcttcattttcatccaagccacaagagtta
cgcatgaggtgtggattgtcatttgttgacttatcgggtttagtggacatgcgttcgtta
agtttgatcgtctcatcattgaaaccatacaatttattattattgcccgatttcagtgta
aatcaaaacacaattgaagaaatgaatggtttggcggctgtcaagcagatgtttgatcag
caacaagatcagcatcaacaggagcaaaataagaagtctttagcgaactcatcgagatat
ttatctttggcaacaataagaggaggcatttcgaatttcgttacaagtaagaacagtgct
ggtaagctggcaattgtcgctgtacagtgcaatacaccggttaagattggtggtgacgac
tctgatgatactggcatcggtttaagtaacttcgaaattaaattagatgatagtattatt
gatagcttaaaatggcaaaatattgatggcagttatagagtcgcccaggtgtatggtgag
ctagaaatacataaccaagatttgcctaataagaaacagaagactatcagtgactatatg
aattcatccacccaattcaccttgaagcatatttccaatcaagacttcttaaagcaacaa
caagcactcgtagatgcacatgccgcaactactggccaattactcaataataacggtcca
aaattggccattgggaatattagattaccagagctcaaaaagaagctcatcagccgtaat
atgaatgcagaattcaagagtgaaggtacattggttgtgaacaatagtctagccataaga
aaagttacctacagcaatgtagaaggtgaagacaccggtgacatagtcattgatggtgct
atgggcccattatactacgaaattaaagactgtatacgtgaaatgttagcctatgtataa
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