Debaryomyces hansenii: DEHA2D13530g
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Entry
DEHA2D13530g CDS
T01026
Name
(RefSeq) DEHA2D13530p
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dha
Debaryomyces hansenii
Pathway
dha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHA2D13530g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2D13530g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DEHA2D13530g
mRNA degradation factors
3'-5' decay
Pan complex
DEHA2D13530g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
2901170
NCBI-ProteinID:
XP_459065
UniProt:
Q6BRV5
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All DBs
Position
D:1138626..1140608
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AA seq
660 aa
AA seq
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MNINLDSAKDTFCKNVLIYGYCKYENKGCAFSHTVKPTSSVPGSQGSNATTNSSGNTNAD
MKKKFNFNTPSFQPSTVPNLTNKFSNLSPNLKEIPVFVPSGGMSNADSGGMNEPEMNDSV
TPNKKFNASTPSFMPSNPYISNNDQISAPSPVMAQSVSTPGAKANGNIQHNPYLPGNAGT
PQPTSAVAAPNSADVFFQQPTSSYPLQHHLYAPAPPPRLTIPLPPHEINVNSMFIPNDLR
ETLLKRNEATLQTLPRSNLPDHVNIYHSLVPIDTSFENISKVYELPSFVYKVFSNVDGNP
YALRKIDIQSVLRITNELPFKYIKKWKSVKCANIVQLQEAFTSMAFGGSYSSLIVTYDYF
PNSNTLQEQHISRRLGGKLEPITEELLWNYVIEITNALINIHENNLAARSALHLSKILVT
NKNRVRLGGVGISDILNYEDDEEQIQQKGLDAFRHELQQADIKKFGKLILDLAALCLPNN
ARNHEPKDLISLLKTSTTVNFSGEFINLLTELNMNTSDLQEFNRNHLSRRILNFCSNAQD
SQDFMESQLSTELENARVFRLITKLNFIIDRPEYDNDPNWQENGNKYIIKLFRDYIFFQY
DEFGKPVCDLSRVLTNLNKLDAGIDEKFLLVNKDEKNCIIVSYKEIRDIIDSAFRTLTRG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaatctagattcagcgaaggatacgttctgcaaaaacgttctaatatatggg
tactgtaaatatgaaaataaaggatgtgcttttagccatacagttaaacccacgtctagc
gtaccggggtcacaaggaagtaacgcaacaacaaacagttcaggtaacactaatgcagac
atgaaaaagaagtttaattttaatacaccatcgtttcaaccgtcaaccgttccgaattta
acgaataagttttcaaatttgtcgcctaatttgaaggaaataccagtgttcgtgccatct
ggaggaatgagtaatgctgattcaggcggtatgaacgaaccagaaatgaacgattcagtc
actcctaataagaaattcaatgcgtcaacaccatcattcatgccatctaatccatatatc
tcaaacaatgaccaaatttcggcaccttctcctgttatggcacaatctgttagtacccct
ggggccaaagctaatggaaatatacaacataatccatatttaccagggaatgctggtaca
ccacaaccaacttcagcagtggcagctccgaactcagcagatgtattttttcaacaacct
acttcgtcgtatccgctacaacatcatttgtatgccccagcaccacctcctaggttgact
ataccgttaccgccacatgaaataaacgtgaacctgatgttcattccaaatgacttgaga
gaaacgttattaaagagaaacgaagctactttacagacgttgccaagatctaatttgcct
gaccatgtaaatatataccactcgttggtcccgatcgacacttcatttgaaaatatatcg
aaagtgtatgaacttcctagttttgtttataaagtgttttctaatgtggatggtaatccg
tacgcattgagaaaaatcgatatacaatcggttttacgaataaccaatgaattgcccttc
aaatatatcaaaaaatggaagtctgttaaatgcgcaaatatcgttcagttacaggaagca
ttcacaagcatggcgtttggcggctcatacagctccttgatagttacctatgattatttt
cctaactccaacacattgcaagagcaacatatcagtagaagattaggaggtaaattggaa
ccaataacagaagaactattatggaactatgtgattgaaattaccaacgcattaataaat
atacacgaaaataatttggcagcaagatcggcattgcatctatctaagattcttgtcaca
aataaaaatagagtcagattgggcggtgttggtataagtgatatcttgaactatgaagac
gacgaagaacaaatccaacaaaagggtttagatgcctttagacacgaattacaacaagct
gatatcaaaaaattcggaaaattaatattagacttggcagctttatgcttgcccaataat
gctagaaatcatgagccaaaagacttgataagtcttttaaagacgtcaactaccgtcaac
ttcagtggtgaattcattaaccttcttacggaattgaacatgaatacatccgatttacaa
gaattcaacagaaaccatttgtcccgcagaatcttgaacttttgcagtaacgcgcaagac
ctgcaagatttcatggaatcacagctctcaaccgaattggaaaacgccagggtcttcaga
ttaataacaaagctaaacttcatcatagacagacccgaatacgataacgatcctaattgg
caagaaaacggcaacaagtacattatcaagttgttcagagattacatattcttccaatac
gacgaatttggaaaacccgtatgtgatttatcccgggttctaaccaacttgaataaacta
gatgctggtatcgatgagaagttcttgcttgtcaataaagatgaaaagaattgtattatt
gttagctacaaggaaatcagagatattattgactcagcatttagaactctcactagaggc
taa
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