Debaryomyces hansenii: DEHA2D15466g
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Entry
DEHA2D15466g CDS
T01026
Name
(RefSeq) DEHA2D15466p
KO
K12857
Prp8 binding protein
Organism
dha
Debaryomyces hansenii
Pathway
dha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2D15466g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dha03041
]
DEHA2D15466g
Spliceosome [BR:
dha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
DEHA2D15466g
Complex C
U5 SnRNP specific factors
DEHA2D15466g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
2901662
NCBI-ProteinID:
XP_459155
UniProt:
Q6BRL5
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All DBs
Position
D:1289479..1290498
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AA seq
339 aa
AA seq
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MSLVKRQKIDDGDRRALVQSRSLGARNGGGILYNEAVILEGHEGSVLSTRFSHNGDYIAS
GGLDKNILLWKLPYNEEEESPNYGEIKGHKSAVTSVRWLYDDITLASASADTTVGFWDGE
TGKRTKKCIGHELAVNDISVSKDSLALSASDDGSACLWDQRQKEATNKVTTEYPLLSCTF
NNRGNTFYIGGIDPKIQAYDMRVMDKPIWTCEGQVDSITSIAINKDDSILLSRSVNGILR
TYSAREFVPEGIPRMNPYIYDGAPSGNEYQLIRACFSTDNVSIASGSEDKTVTIWDYKSR
KILNKISGHRGATLDIAYHPTERILASTSTDGSIIVREI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagtaaaaaggcagaagatagatgatggcgatcgtagggcattagtccaatcg
cggctgcttggagctagaaatggaggaggtatattgtataatgaagcagtaatcctcgag
ggacacgaaggatcagtactttctacaagatttagccataatggtgattatatagcatct
ggaggattagataagaacattctattatggaagttaccatataatgaagaagaagaatct
cctaactacggagaaataaagggacataaatcggctgttacttctgtgagatggctatat
gacgatataacattagccagtgcaagtgctgatacaactgttgggttttgggatggtgaa
actggaaaaagaaccaaaaaatgtatagggcatgagttagcagttaatgatataagtgtg
tcaaaggattcacttgcacttagtgccagtgatgatgggtcagcatgtttgtgggaccaa
agacaaaaggaagcaacgaataaagtgacgaccgaatatccattgttgtcttgcacattc
aataatagaggtaatacattttatattggaggaattgaccctaagattcaggcatatgac
atgagagtgatggataaaccaatctggacttgtgaaggccaagtagactctataacatca
atagctataaacaaagatgattctatattattgtctcggtctgttaatggtatattgagg
acttatagtgctcgagaatttgttcctgaaggtattcctaggatgaacccatacatatat
gatggcgctccttcaggaaatgaataccaattaataagagcatgcttcagcacggacaat
gtttcgatagcttcaggttcggaagataaaacagtcaccatatgggattacaaatcacga
aagatacttaataaaatttcaggtcatagaggtgctacgcttgatattgcttatcatccg
acagagcgtattttagcatctacttctacggatggctcaattatagttagagagatatag
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