Debaryomyces hansenii: DEHA2D18722g
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Entry
DEHA2D18722g CDS
T01026
Name
(RefSeq) DEHA2D18722p
KO
K10756
replication factor C subunit 3/5
Organism
dha
Debaryomyces hansenii
Pathway
dha03030
DNA replication
dha03410
Base excision repair
dha03420
Nucleotide excision repair
dha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEHA2D18722g
03410 Base excision repair
DEHA2D18722g
03420 Nucleotide excision repair
DEHA2D18722g
03430 Mismatch repair
DEHA2D18722g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dha03032
]
DEHA2D18722g
03036 Chromosome and associated proteins [BR:
dha03036
]
DEHA2D18722g
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2D18722g
DNA replication proteins [BR:
dha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DEHA2D18722g
DNA Replication Termination Factors
ELG1-RFC complex
DEHA2D18722g
Chromosome and associated proteins [BR:
dha03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DEHA2D18722g
DNA repair and recombination proteins [BR:
dha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DEHA2D18722g
Check point factors
HRAD17(Rad24)-RFC complex
DEHA2D18722g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_16
KCNQ2_u3
AAA_19
AAA_24
Motif
Other DBs
NCBI-GeneID:
8998580
NCBI-ProteinID:
XP_002770358
UniProt:
B5RTM7
LinkDB
All DBs
Position
D:complement(1540384..1541478)
Genome browser
AA seq
364 aa
AA seq
DB search
MSLWVDKYRPKSLEQLSYHESITQNLAALASTGDFPHLLVYGPPGSGKKTRIYCTLHELF
GPQVEKLKIDVKVFTTSSNRKLEFNVLSSPYHLEITPSDMGNNDRVVIQDLLKDVASTEQ
VDFSNQSKSASKHRFKVVIINEADSLSRDAQAALRRTMEKYSANIRIIMICNTTSNIISP
IKSRTLLVRIPAPSHKEISNILSNIADKESVKFNPSNESKKQEFFDKVSKNSDSNLRKAL
LCFETISMQSESIAINNTDSAMIALDWEVIIQNLAKSIISNRTVANLAKVRVVFYELLSH
CIPPRIILKKLLFNLIEVSNSNESITQSLVEIGAVFDERLSLGQKSIFHLEGFVAKSMVA
LEKQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtgggttgataaatacagacctaaaagtttggagcaattgtcgtatcatgaa
tcaatcacacaaaatctagctgctttggcaagtacaggagattttccacatttactagtt
tatggacctccaggtagtggtaagaagacaagaatttactgtactttacatgaattattt
ggaccgcaagtagagaaattgaaaattgatgtgaaagtgtttactacttcttcaaataga
aaattagaattcaatgttttaagttcaccttatcatttagagatcacaccttctgacatg
ggaaacaatgacagagttgtaattcaagatttattgaaagatgttgcatcaacagaacaa
gtggatttcagtaaccaatctaagtctgcttcaaagcataggtttaaagttgttataata
aatgaagcagattcgttaagtagagatgcacaggcagctttgagaagaacgatggaaaaa
tactccgccaatatcagaataattatgatatgtaatacaacatctaacatcatatcgcca
attaaatcaagaacattgttagtaagaatacctgcaccatctcataaagaaatcagcaat
attctatcgaacatagccgataaggagtcagttaaatttaatccttctaatgaatcaaag
aagcaagaattcttcgacaaggtatctaaaaactcagactctaatttgagaaaagcttta
ttatgctttgaaactattctgatgcaaagtgaactgatcgcgattaataatacagacctg
gcgatgattgcattggattgggaagtaattattcaaaatttggctaaatctattatatca
aatagaacagtcgctaatctcgctaaagtaagagtagtattttatgaattgttatcccat
tgtattcctcctagaattattttgaagaagctattatttaacttgattgaagtatctaac
agcaacgaatctataactcagagcctagttgaaatcggtgcagtatttgatgaacggttg
agcttaggacagaagagtatatttcatttggagggttttgttgctaaatctatggttgca
ttggaaaagcaatag
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