Debaryomyces hansenii: DEHA2E02398g
Help
Entry
DEHA2E02398g CDS
T01026
Name
(RefSeq) DEHA2E02398p
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dha
Debaryomyces hansenii
Pathway
dha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2E02398g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dha03041
]
DEHA2E02398g
Spliceosome [BR:
dha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DEHA2E02398g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
2902024
NCBI-ProteinID:
XP_459437
UniProt:
Q6BQT3
LinkDB
All DBs
Position
E:complement(217077..218564)
Genome browser
AA seq
495 aa
AA seq
DB search
MEIDEIPIVNDPYINKGTHLSDPKDVPTIDEEVRMELRRLGEPITYFGEGKAERRERLIK
LVSELPNTNFKFAYVEENNKEEEGSDEDIEEDEDEDFYTPGSEALLESRKRFLQYSLQKS
SKRNELQKNLSKEQDFIKTLKHRRTINSNLSKFTLYGTQLISGNTRTLSAVRFSSDNSLI
ACGSWDGAVYVLNRDDLKTKHYSGPGHHAEKVSALDWDLYNNNRFMVTGGNEGNINFWTI
SDSDDTEPQKMTPSLSIKDAHQHRISKTLFHPTGKYVVSTSFDQTWKLWDIEKPQDALVQ
QEGHSKEVFCGSFHPDGGLLSTGGLDAIGRIWDLRCGRSIATLQGHIKGIYSMDWSQNGY
HLATASGDCAVKIWDIRKFDNSNSNGELFSIPSHTKLVSDVKFFHRRDDTKPSGQLSTTV
TDEFEKNPEQLDTNGTFLASASYDGMVNIWSADNWVKVKSLKGHSDKVMSCDISGDGCFI
VSSGWDRSVKLWSVL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagatagacgagatacccattgtcaatgacccatatataaacaagggtactcaccta
ctggacccaaaggatgtacctacaattgatgaggaagttcgaatggaattgagaagattg
ggggagccaatcacgtatttcggtgaaggaaaggcagaaagaagagagagattaataaag
ttagtgtctgaattaccaaacacaaacttcaagtttgcatatgtcgaagaaaataataaa
gaggaagaagggagtgatgaagatatagaagaagatgaagatgaggatttttatactcca
ggttcagaggctttgttagagtcacgtaaaagatttttacaatattcacttcaaaagtcg
tcgaaacgaaatgaattacaaaagaatttatcgaaagaacaggatttcatcaagacattg
aaacatcgtcgaacgataaattccaatctatctaaattcacactttatggaacgcagtta
atctctggaaatacaagaactttgtcggctgtgcgattttcatctgataattcgctaata
gcttgtggatcctgggatggagcagtctatgttttgaatagagacgatttaaaaacaaaa
cattatctggggccaggtcatcatgcagaaaaagtaagcgcattagattgggacttgtat
aataacaacaggtttatggttactggtggcaatgaaggaaatatcaatttctggacaatt
tctgattcagatgatacagaaccacagaaaatgactccatcgttgtcaataaaagatgca
catcaacaccgaataagcaaaacgttattccatcctacaggaaagtatgtagtttctaca
tcatttgaccagacgtggaagctttgggacattgaaaaaccgcaagatgcgttggttcaa
caggaaggtcactccaaagaagtattttgcggttcgttccaccctgacggtggcctctta
tctactggagggcttgatgctataggtagaatttgggatttgaggtgcggaagatcaatt
gcaacattacaaggccacataaaaggcatatatagtatggattggtctcaaaatggatac
catttagcaactgctagcggggattgtgccgtaaagatatgggatatacgtaaattcgat
aattcgaacctgaatggtgaattattttcaatcccttcgcatacaaaattggttagtgat
gttaaattttttcacagaagagatgataccaagccactgggacaattgagcacaacagta
accgatgagtttgagaagaacccagaacaactcgatacaaacggtactttcttagcaagt
gcatcttatgatggaatggttaatatatggtcagctgataattgggtcaaagtgaaaagt
ttaaaaggtcatagtgataaagttatgagttgtgacattagtggagacgggtgcttcatt
gttagtagtggttgggatagatctgttaaattatggagtgtgctatag
DBGET
integrated database retrieval system