KEGG   Debaryomyces hansenii: DEHA2E02398g
Entry
DEHA2E02398g      CDS       T01026                                 
Name
(RefSeq) DEHA2E02398p
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dha  Debaryomyces hansenii
Pathway
dha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DEHA2E02398g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dha03041]
    DEHA2E02398g
Spliceosome [BR:dha03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    DEHA2E02398g
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML PRP4 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT122_1st WD_LRWD1 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 2902024
NCBI-ProteinID: XP_459437
UniProt: Q6BQT3
LinkDB
Position
E:complement(217077..218564)
AA seq 495 aa
MEIDEIPIVNDPYINKGTHLSDPKDVPTIDEEVRMELRRLGEPITYFGEGKAERRERLIK
LVSELPNTNFKFAYVEENNKEEEGSDEDIEEDEDEDFYTPGSEALLESRKRFLQYSLQKS
SKRNELQKNLSKEQDFIKTLKHRRTINSNLSKFTLYGTQLISGNTRTLSAVRFSSDNSLI
ACGSWDGAVYVLNRDDLKTKHYSGPGHHAEKVSALDWDLYNNNRFMVTGGNEGNINFWTI
SDSDDTEPQKMTPSLSIKDAHQHRISKTLFHPTGKYVVSTSFDQTWKLWDIEKPQDALVQ
QEGHSKEVFCGSFHPDGGLLSTGGLDAIGRIWDLRCGRSIATLQGHIKGIYSMDWSQNGY
HLATASGDCAVKIWDIRKFDNSNSNGELFSIPSHTKLVSDVKFFHRRDDTKPSGQLSTTV
TDEFEKNPEQLDTNGTFLASASYDGMVNIWSADNWVKVKSLKGHSDKVMSCDISGDGCFI
VSSGWDRSVKLWSVL
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggagatagacgagatacccattgtcaatgacccatatataaacaagggtactcaccta
ctggacccaaaggatgtacctacaattgatgaggaagttcgaatggaattgagaagattg
ggggagccaatcacgtatttcggtgaaggaaaggcagaaagaagagagagattaataaag
ttagtgtctgaattaccaaacacaaacttcaagtttgcatatgtcgaagaaaataataaa
gaggaagaagggagtgatgaagatatagaagaagatgaagatgaggatttttatactcca
ggttcagaggctttgttagagtcacgtaaaagatttttacaatattcacttcaaaagtcg
tcgaaacgaaatgaattacaaaagaatttatcgaaagaacaggatttcatcaagacattg
aaacatcgtcgaacgataaattccaatctatctaaattcacactttatggaacgcagtta
atctctggaaatacaagaactttgtcggctgtgcgattttcatctgataattcgctaata
gcttgtggatcctgggatggagcagtctatgttttgaatagagacgatttaaaaacaaaa
cattatctggggccaggtcatcatgcagaaaaagtaagcgcattagattgggacttgtat
aataacaacaggtttatggttactggtggcaatgaaggaaatatcaatttctggacaatt
tctgattcagatgatacagaaccacagaaaatgactccatcgttgtcaataaaagatgca
catcaacaccgaataagcaaaacgttattccatcctacaggaaagtatgtagtttctaca
tcatttgaccagacgtggaagctttgggacattgaaaaaccgcaagatgcgttggttcaa
caggaaggtcactccaaagaagtattttgcggttcgttccaccctgacggtggcctctta
tctactggagggcttgatgctataggtagaatttgggatttgaggtgcggaagatcaatt
gcaacattacaaggccacataaaaggcatatatagtatggattggtctcaaaatggatac
catttagcaactgctagcggggattgtgccgtaaagatatgggatatacgtaaattcgat
aattcgaacctgaatggtgaattattttcaatcccttcgcatacaaaattggttagtgat
gttaaattttttcacagaagagatgataccaagccactgggacaattgagcacaacagta
accgatgagtttgagaagaacccagaacaactcgatacaaacggtactttcttagcaagt
gcatcttatgatggaatggttaatatatggtcagctgataattgggtcaaagtgaaaagt
ttaaaaggtcatagtgataaagttatgagttgtgacattagtggagacgggtgcttcatt
gttagtagtggttgggatagatctgttaaattatggagtgtgctatag

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