Debaryomyces hansenii: DEHA2E10670g
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Entry
DEHA2E10670g CDS
T01026
Name
(RefSeq) DEHA2E10670p
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
dha
Debaryomyces hansenii
Pathway
dha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DEHA2E10670g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dha03021
]
DEHA2E10670g
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2E10670g
Transcription machinery [BR:
dha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DEHA2E10670g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DEHA2E10670g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
VHS
Motif
Other DBs
NCBI-GeneID:
2902904
NCBI-ProteinID:
XP_459771
UniProt:
Q6BPU9
LinkDB
All DBs
Position
E:complement(834575..835822)
Genome browser
AA seq
415 aa
AA seq
DB search
MDIDEPFNPDYYQHLLSSLTLNSRTLITELTTIAEKSTDQASEIVDIIEERIKKCLPQYK
LFTVYLLDSICKNIGNPYNLLFGSRLYKIFTETYLVVTDTPTRQNLINLFKTWSNGRTNS
GLELFPAKVIQKIEQFIIRATSISQTNQPSLPLKLTPDMLLREGNCLLQYIIVLNGELEK
FPQTNEKVKEFLDANNRIRNNVISVINNVSDSILSNSKQEFENNVTSYHTDLQGARKVMD
DQSFQQKQFLGSNTFKEDTSQIKIEIDLTPNLKFFHFNTPISEDPDLLEYVNDWGKPIVE
RISQIPKPEVARPVKAPFNNLQEEPKSSSSTPEPLTNSLGLNLGSVNFMDSFLGSPKNEI
SKSPINEINENPVDSYDPEHSIVDEDWIHPPTSHPNLKRKNSIDKPVIKKVRFDI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacatagacgaacctttcaatcctgactattaccaacacttactatcgtcattgaca
ttgaattcccgaacgttgattactgaactaacaaccattgcagaaaagagtacagaccag
gcatcggaaattgttgatattatagaagaaagaattaaaaaatgtttgccacagtataag
ctttttacggtttatttactagattctatttgtaagaatatagggaatccatacaattta
ttatttggatcgaggctctataaaattttcactgaaacttacttggttgtgacggataca
cccacaagacaaaacttaattaatctcttcaagacgtggagcaatggtaggaccaattct
gggttggagttattccctgcaaaagttatacaaaagatcgagcagtttataatacgagcc
acctcgattagtcaaacaaatcagccgagtcttccattgaaactaactcctgatatgcta
ttgagagaaggcaactgcttattgcagtacatcattgtactaaacggcgaattggaaaaa
tttccccagacaaatgaaaaggtaaaggagttccttgatgctaataataggattcgaaat
aatgttatctcggtaatcaataatgttagcgacagtattctaagcaattcgaagcaagag
ttcgaaaacaacgttacgtcctatcacaccgatctacagggggcaaggaaggtgatggat
gatcaaagtttccagcagaagcaatttttgggtctgaatacgtttaaggaagataccagt
caaattaagattgaaatcgacctaacccccaatttgaagtttttccacttcaatacgcct
atatctgaagatccagatctattagagtacgtgaatgattggggcaaaccaatagtagag
cgcatatcacagattccgaaacccgaagtggcacgtccagtgaaagccccgttcaacaac
ctacaagaagaacccaaatcatcctcttccacacccgaaccattgactaactccttggga
ttgaatctagggtcagtaaactttatggactcgttcctaggatcccccaagaacgaaatc
tccaaatcccccatcaacgagatcaacgagaaccccgtcgactcgtacgacccagaacac
agcattgtcgatgaagattggatccatccgcctacatctcatccgaatttgaaaagaaag
aactcaattgataaacctgtaattaaaaaagtaagatttgatatttag
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