KEGG   Debaryomyces hansenii: DEHA2E15378g
Entry
DEHA2E15378g      CDS       T01026                                 
Name
(RefSeq) DEHA2E15378p
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
dha  Debaryomyces hansenii
Pathway
dha03022  Basal transcription factors
dha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DEHA2E15378g
  09124 Replication and repair
   03420 Nucleotide excision repair
    DEHA2E15378g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dha03021]
    DEHA2E15378g
   03400 DNA repair and recombination proteins [BR:dha03400]
    DEHA2E15378g
Transcription machinery [BR:dha03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DEHA2E15378g
DNA repair and recombination proteins [BR:dha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DEHA2E15378g
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_2 zf-C3HC4 zf-C3HC4_2 TRAF3_RING zf-C3HC4_3 zf-RING_5 zf-RING_UBOX
Other DBs
NCBI-GeneID: 2902807
NCBI-ProteinID: XP_459974
UniProt: Q6BP96
LinkDB
Position
E:join(1232478..1232490,1232549..1233558)
AA seq 340 aa
MVVEDDRSKDMCPICKTDKYLSPNMNFLINPECYHKICESCVDRIFSLGPAPCPYPKCGK
ILRKNKFKKQIFDDLGIEKEIDIRKRVSGIYNKTEEDFDDLKDYNKYLESVENIIFNLNN
GIDIEETESNLVKYENEHKIEILEKNMRESQKNSDLAKYQEAMARLKQEKVKIQKQMEIE
DLEFQKQQKQELLDKLSTAQSANSEELITQSNNNILKRSSLRKRQLQQLTSQLDQQFQSS
NPFSKQAKAIEDEDNRTPFTPFKGDRELHKNYTFLPDIHKNDAMDVDEDAGLNTYHAPYL
SKLAKDKQYLGAGWRLNNAFERALDEAFTGLCCFIDKEKT
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggtggtggaagatgatcgttcgaaggatatgtgtcctatctgtaagacagataagtac
ttatcacccaatatgaattttctcatcaacccagaatgctatcacaaaatatgtgaatca
tgtgtggacaggatattctctctcgggccagcaccttgtccgtaccctaagtgtggtaaa
atattaaggaagaataagttcaaaaagcagattttcgatgacttgggtatagagaaagaa
attgatatacggaaaagagtaagtggtatatataataaaactgaagaagatttcgatgat
ttgaaggattataacaaatatttggaatctgtcgaaaatataatatttaatcttaataat
ggaattgatattgaagaaacggagtccaatttggttaaatatgaaaatgaacataagatt
gaaatattggaaaaaaatatgagagagagtcaaaagaattcagatttggccaaatatcaa
gaagccatggctcgtttgaaacaagaaaaggtcaagattcagaagcagatggaaattgaa
gatttggaatttcagaaacaacagaaacaggaattattagacaagttatcgactgcacaa
tccgccaattcggaagaattaattacccagtctaataataatattctcaaaagatcttct
ttacggaagagacaattacagcaattgacttcccaattagatcaacaatttcaaagttcg
aatccgttctctaaacaagctaaagctatagaagatgaagataatagaacaccattcacg
ccatttaaaggtgaccgtgagttgcataaaaactatacatttttgcctgatatccataag
aacgatgcaatggacgtggatgaagacgctggattaaatacttatcatgctccttatttg
agcaagcttgcgaaagataaacagtatttaggtgctggatggagactaaataatgcattt
gagagagcattagatgaagcattcacaggtttatgctgtttcattgataaagagaagacc
taa

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