Debaryomyces hansenii: DEHA2E15840g
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Entry
DEHA2E15840g CDS
T01026
Name
(RefSeq) DEHA2E15840p
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dha
Debaryomyces hansenii
Pathway
dha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DEHA2E15840g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dha03009
]
DEHA2E15840g
Ribosome biogenesis [BR:
dha03009
]
Eukaryotic type
Pre-60S particles
RNases
DEHA2E15840g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
CHORD
Sigma54_DBD
Motif
Other DBs
NCBI-GeneID:
8998846
NCBI-ProteinID:
XP_002770491
UniProt:
B5RU22
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All DBs
Position
E:join(1282504..1282508,1282573..1284271)
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AA seq
567 aa
AA seq
DB search
MNFSDGYEPTHTSSKFFIFRAPLHRVTIAILSVYLGFFIDTRCLITKEDAMFRKRNGYFD
KLECPELRKNKKCTILNCIFNHELESKAINSRKRSLDTDELPKPVKKPDQSDKHIVEVEK
AQDTSYTIPKAINHLQIPRSDRTINVKKIANHYLSLNHDTPNKDAIEKEHEIADSSNNVE
EYRARIKTLLEGDKEASVEDPKFILPKEIKSTAPATIQVRKKFIQIMIDALKKNDPNIRT
PILKATEEEFKVAIECSANTYPQSIKRKIYELSNPEKFEKKSKKLTDSEYLSKLEELVIP
RETLIKYGYIMNIPSAVVPENVRTCRRCNNEFKLHEQLKPIQCHYHFGKVIKKDSFNKVY
ECCGGIVGGETDCCEVSEHHVFYWNNPEEMQYALPFHKTSELLGVNSQSFKAVGIDCEMG
FTTRGFELLRITAVDFFSGEDIIDILVRPKGDVIDLNTRWSGIAEIKEEAMNFEDSIKLL
GEVIDSNTILIGHGLENDVNSMRLIHERIIDTAVLYPKHKTSPKFRFPLKYLTFKYLGRT
IQSGEHDSSEDSLAAIDVVKYFINQDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcagatggttacgaaccaacgcacacatcttcaaagttttttatttttagg
gcaccgttacaccgggtaacaattgctatacttctggtctatttagggttttttatagat
actaggtgtttaataactaaagaagatgccatgtttaggaaaagaaatggatattttgac
aagttagaatgcccagaactacgtaagaacaaaaagtgtacgattctcaattgtattttc
aaccatgaattggaactgaaagcaattaattctaggaaaaggtctctagatactgatgaa
ttgccaaaaccggtcaagaaacctgatcaatcagataaacatatagtggaagtagagaaa
gcacaagatacctcctatacaattccaaaggctataaatcatttacaaatacccaggtca
gatagaactatcaatgtcaaaaagattgctaatcattatctcagtttgaatcacgataca
ccaaataaagatgcaattgaaaaagaacacgagattgcagatagcagtaataatgtagag
gaatatagggcccgtattaagacgttgttggaaggagacaaagaagcaagcgttgaagat
ccgaaatttatattaccaaaagagatcaagctgactgcacctgcaacaattcaagtaagg
aaaaaattcatccagattatgattgatgcattgaagaagaatgatcctaatatacgaact
cctatattaaaagccacagaagaagagttcaaagttgctattgagtgctcggcaaatact
tatccacaatcaattaagaggaaaatttatgaattgagtaacccagagaaatttgagaag
aagtctaaaaagcttaccgattctgagtatctttctaaattagaggaattagtcatacca
agagaaacactcataaaatatgggtatatcatgaatattccgagtgcagtggtaccagag
aatgtcagaacatgtagaagatgtaacaatgaattcaagctacacgaacaactcaagccc
atacaatgtcattatcattttggaaaagtaattaaaaaagactcatttaacaaagtatac
gaatgttgtggaggtatcgttggcggcgaaacagattgctgtgaagtttcagaacatcat
gtcttttactggaataatccagaagaaatgcaatatgcattaccatttcataagacaagt
gaattgcttggtgtgaatagccaaagttttaaagctgttggcattgattgcgaaatgggg
tttactactagaggcttcgaattattgagaattacagctgtcgattttttcagtggcgaa
gatattattgatattttagtccgaccaaagggtgatgttattgacttgaatacgaggtgg
tctggaattgcagaaatcaaagaagaagcaatgaattttgaggatctgatcaaacttcta
ggtgaagttattgattctaataccattctaattggccatggacttgaaaatgatgtgaat
tctatgagacttatacatgaaagaataattgatactgccgtgttatatccaaagcacaag
acatctcctaagttcagattccctcttaaatacttaactttcaagtatttaggcagaact
attcaatcaggagaacacgacagtagcgaagattcccttgcggctattgacgtagttaaa
tattttataaatcaagatccatag
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