Debaryomyces hansenii: DEHA2E16170g
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Entry
DEHA2E16170g CDS
T01026
Name
(RefSeq) DEHA2E16170p
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
dha
Debaryomyces hansenii
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dha03016
]
DEHA2E16170g
Enzymes [BR:
dha01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DEHA2E16170g
Transfer RNA biogenesis [BR:
dha03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
DEHA2E16170g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF6689
Motif
Other DBs
NCBI-GeneID:
2902431
NCBI-ProteinID:
XP_460005
UniProt:
Q6BP65
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All DBs
Position
E:complement(1313730..1314839)
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AA seq
369 aa
AA seq
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MGKRNRVNNNQIYANALPIILSTDEYGRLPQIYPHNPVSWIYFAYQYLSIQARTVPQLRT
KPFKVDYEDGVFKVNDEEDMRNLWKQGFFGKGTLSRSDPSWKTRTNRRLNLDEDLDITSE
EITRMRREERKKFKTERSKLQDLELKQRQNNISNAELQTLEEVRQSLNVSRLENPNYNQA
LTQLEALRIEDQNIIHDGTLLDLEYLQLQKTEVFFLRFALNVINIDLSLSQLFSECCERD
ISPNNSFILEYVVYHHYRSLGWCVRSGIKFGCDMLLYKRGPPFSHAEHAILIMSDSHHDW
SSISSISRVIGGVKKNLVLTFIDGPTTEEFDAVVNSSYSCANEKLYNIFKLYKITEILYR
RWIPSRNRD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgaaacagagtaaataacaatcaaatatatgccaatgctttgcccataata
ttatctaccgatgagtatgggaggttacctcagatatatccgcataatccagtgtcgtgg
atatattttgcatatcagtatttgagtatacaggccagaacagtacctcaattgcgtacc
aaaccattcaaggtagactatgaagatggggtgtttaaagttaatgatgaggaggatatg
cgaaacttgtggaaacaaggtttttttggcaaaggaacattgtctagatcagatccgtca
tggaagactaggaccaacaggagattgaacctcgatgaagacttggatatcacgagtgaa
gagattacaagaatgagaagagaagagagaaagaagttcaagacagaaagaagcaaattg
caggatttggagctaaagcaacgacaaaacaacatttcgaatgctgagttacaaacctta
gaagaagtccgtcaaagtttgaatgtgctgaggctcgaaaaccctaactacaaccaggcg
ttgacccagttagaggcccttaggatcgaggaccagaacatcattcacgatggcaccctc
ttggacctcgaatatttgcagttgcagaaaactgaggtgtttttcttacgtttcgccctc
aatgtcatcaacattgatttgtcgctctcacaactcttttctgaatgctgtgaacgcgac
atttcgccaaacaactcgtttattctcgaatacgtcgtctaccaccattacaggtctttg
ggatggtgtgtgaggtctggaataaagtttggttgcgatatgttgctctacaaaaggggc
cctcccttcagccacgccgaacatgcgattctaataatgtcggacagccaccacgactgg
tccagtatctcttctatatcgcgggtcataggtggtgtcaaaaaaaaccttgtgttaaca
tttattgatggtcctacgaccgaagaattcgatgcggttgttaactcatcctattcatgc
gccaacgaaaaattgtataatatattcaagctctacaagataacggaaatactatataga
agatggattccaagtcgaaacagagattga
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