Debaryomyces hansenii: DEHA2F03388g
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Entry
DEHA2F03388g CDS
T01026
Name
(RefSeq) DEHA2F03388p
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
dha
Debaryomyces hansenii
Pathway
dha03440
Homologous recombination
dha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DEHA2F03388g
03460 Fanconi anemia pathway
DEHA2F03388g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dha03032
]
DEHA2F03388g
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2F03388g
Enzymes [BR:
dha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DEHA2F03388g
DNA replication proteins [BR:
dha03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
DEHA2F03388g
DNA repair and recombination proteins [BR:
dha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
DEHA2F03388g
Bloom's syndrome complex (BTR)
DEHA2F03388g
FA (Fanconi anemia) pathway
DEHA2F03388g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
2903417
NCBI-ProteinID:
XP_460513
UniProt:
Q6BMQ8
LinkDB
All DBs
Position
F:complement(294495..298598)
Genome browser
AA seq
1367 aa
AA seq
DB search
MIGNNLAEHLKWVDLNKPQIPNAKIISILARHGSDSSINNGIRGSTGSVFRATGHMGEMN
SSVGSQQTIPKSGATSTRINIRPPSDQPLQQSTQTANNMETLSIPETGSIASKDRASNVS
DIDSTTKPAKHTNIQSESNGNIANNNNKTTNINNPKEEEDENVIDLTMEAPRNQKKQKLN
PDSQTSIQQAYIQICEQKIALLMERFTTIESTAISLDDKKNYLNKTFGPKFKQINENQSS
LRGKLLFLTDDLQHDDTSSLSELNEFPNFDSDRISDSPKNLNTIDKIDFCSQFSEVNQSN
IARAMNIRENLESTNPNSQKPSSASNEESEFHLVDETSSPSRYADNLNEARELVMQSNLR
NKSNPPKIINNSESEDDEDNFGDNTMDGLRTPSQDRNDEYDLGSFIEFEKQNLDNESVDE
SYIESQRNKHESDNSDNYTELDSDNEIDNIRLSPDVAENFGIKYNDLPNSEIDLISNIDN
NNDMNDDNGNDDDNGNDDDIEEIEDFTTQLNQERELNNTEDIIEISSDDEGDANYDMFVK
PSTIKNTLVETKPNPLIVSKSPLTENNLAMNVPSQHLDSDIDFSDDEDELINILNNHKPN
KENIPPNSEAFIKEVYSKLNSVFKLSNFRPNQLHAISSTLNGKDVFVLMPTGGGKSLCYQ
LPALVKSGKTRGTTIVVSPLISLMQDQVQHLLNKNIKAGMVSSKGSASERKSTLDSFRNG
QLDLVYLSPEMINASQHIQRIITKLYDMNELARVVVDEAHCVSSWGHDFRPDYKGMNYFK
HNYPKVPVMALTATANEKVRMDIIHHLKMDNPILLKQSFNRLNLFYEIKWKTSNTLEWIK
NYILTKQVNKTGIIYCHSKQSCEHTSEKLNEWGVNASYYHAGLSPTDRFEIQNKWQQNEL
QIICATIAFGMGIDKPDVRYVIHLFIPRTLEGYYQETGRAGRDGAYSECIMFYSYKDARS
LQNMIQRDEELDREGKENHLAKLRQVVQYCENTTDCRRKQVLHYFNEQFNPITCNKKCDN
CINSSNITIVEKDVTGYAKDILKLVKSIQDDRVTVLHCQDVFKGSNNSKIMKFGHNLNPY
HGKGRALDKTDVERIFFYLLSEGCLCEYQIMKGGFASNYVKLDKQAESVLHDRKFIKINF
SSESKQRSTGNATISGSVNPTNGYQFQSFVSASRIQIPSITNFTSAGVQNSDHIKHSCNE
LNNMRMQIMVDSSLNSAENVFNDDTLKDMAHKLPTNKRDFGKLASITKEQLNYFPQFKKL
LGSLSKERKNQVPDSTPSSTTSPYFGNQQDSNDPSTWRSTYSQTENSTAYVNIKNKYSRG
NRRSSQSSQRGYKSQRGRNQKTQRSQRSQRVSKPRSNQKNTPRGMPL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgattgggaataatttagcagaacacttgaaatgggtggacttgaacaagccccagata
cccaatgcgaagatcattagcatattggcaagacatggctctgatctgagtataaataac
gggatcaggggatccactggatcagtatttcgagcgacgggtcatatgggtgagatgaat
ctgtctgtaggttcacagcagactattccaaaatctggtgctactagcactcggatcaac
atacgaccgccatcggatcagccgttgcagcagtctacacaaacagcaaataatatggag
actctatcaataccggagacagggctgatagccagtaaagatcgagctagcaacgtgtct
gatattgatagtacgactaaacctgctaagcatacaaacatacaatcagagagtaacggc
aatatcgccaataataacaataaaactacaaatattaataatcccaaagaagaggaagac
gaaaatgtgatagatctcacgatggaggcccctcgaaatcagaagaaacaaaaattgaat
cctgatagtcagacactgattcaacaagcatatatacagatctgtgagcaaaagatagca
ttgttgatggagaggtttacaacgattgaatcgaccgctatttcgcttgatgataaaaaa
aattatctaaacaagacttttgggccgaaattcaagcaaatcaatgaaaaccaatctagc
ttaagaggaaaattactatttttaacggatgatttgcagcatgatgatacatcaagtctc
tctgagcttaatgaatttcctaattttgattcggataggatttctgattcaccaaaaaac
ttaaacacaatcgataaaattgatttttgctctcagttctctgaggttaatcaaagtaac
atagcaagagctatgaatattcgggaaaatttagaatctactaacccaaactctcaaaag
ccttcctctgcgagtaatgaagaaagcgaatttcatttagtggatgaaacttcgtcgcca
tcgagatatgctgacaatttgaacgaggctagagaacttgttatgcaatctaatttgagg
aataagctgaatcctccgaaaataattaataatagcgagagtgaagatgatgaggataat
tttggagataataccatggatggcttacgtacgccgagtcaagatagaaatgatgagtat
gacctaggcagttttattgaatttgaaaaacagaatttggataatgaatccgttgacgag
tcatatattgaatctcagagaaacaaacatgaatcagataactcggataactacaccgag
ctcgatagtgataatgagattgacaacattagactaagtcctgacgtggcggagaatttt
ggtatcaaatacaatgatctacctaattccgaaattgatcttatctcaaacatcgataat
aataatgatatgaatgatgacaatggtaacgatgatgacaatggtaacgatgatgacatc
gaagaaatagaagattttacaacacaattaaatcaagaaagagaattgaataataccgaa
gatataatcgaaataagttctgatgatgaaggtgatgcgaactacgatatgtttgttaaa
ccatcaacaatcaagaacaccctagtcgaaacgaaaccaaacccacttattgtttccaag
tctcctcttacagagaataatttagcgatgaatgtaccttctcaacatttggatagcgat
attgattttagcgatgatgaagatgaactaatcaacattttgaataatcataaacctaat
aaggaaaatattcctcctaattcagaagcatttataaaagaggtttacagtaaattaaat
tcagtgttcaaactttcaaattttaggcctaatcagttacacgctataagttcaactttg
aatggaaaagatgtgtttgtccttatgcctactggtggaggtaaatcattatgttatcaa
ttaccagcattagtaaagtcaggtaagactcgaggaaccactatcgttgtatctccgcta
atttctttaatgcaagatcaagttcagcatctattgaacaagaatatcaaggcgggaatg
gtcagttcaaaaggttctgcatcagaacggaaatcaacacttgattcattcagaaatggt
caattagatttggtttacctatcccccgaaatgattaatgcatcgcagcatattcaaaga
attataacaaaactatatgacatgaacgagttagccagagttgtcgttgatgaagctcat
tgtgttagctcttggggccatgactttagaccagattacaaaggcatgaattattttaag
cacaattaccctaaggttcctgttatggcattaacggcaacagcaaatgaaaaagttaga
atggatattattcaccatctaaaaatggataacccaatactattgaagcaaagtttcaat
agattaaacttgttttatgaaattaaatggaagacatcaaatactttagaatggataaaa
aattatatcttaactaaacaagttaataaaactggtatcatatattgtcattcgaaacag
tcctgtgagcatacatctgaaaaactaaatgaatggggagtaaacgcatcatattaccat
gcgggactttcgcctactgacagatttgaaatccaaaacaaatggcagcaaaatgaactt
caaattatatgtgcaactattgcttttggtatgggtattgataagcctgacgttcgatat
gttatccatttgttcatacctagaactctagaaggatattatcaagagacagggagagct
ggtagagatggagcctattctgaatgtataatgttttattcctataaggatgccaggtcg
ttacagaatatgattcagagagacgaggaattggatcgcgaaggtaaagaaaaccattta
gcgaagttgaggcaggttgttcagtactgtgaaaacactacagattgccgtcggaaacaa
gttttgcactattttaatgagcaatttaacccaataacatgtaataagaaatgtgataat
tgcatcaattcaagcaatatcaccatcgttgaaaaggatgttactggatacgctaaagat
atattgaaattagtgaaatctattcaggatgatagggttaccgtcttgcactgccaggat
gtattcaaaggttcaaacaatagcaagattatgaaatttggccataacctaaatccgtat
catggtaaaggtagagcacttgataagactgatgttgaaaggatatttttctatttgttg
agtgaaggatgtctttgtgaataccaaattatgaaaggtgggttcgcgtctaattatgtt
aaacttgataaacaggcagaatctgttttgcacgatagaaaatttattaagataaatttc
agctctgaaagtaagcaaagatctacaggaaacgctacaattagtggaagcgtgaatccc
acaaatggctatcaattccaatcatttgtcagtgcatcacgtattcaaatcccttccata
actaattttacaagtgctggagtacaaaacagcgaccatatcaagcattcttgtaatgaa
ttgaataatatgagaatgcagataatggtcgatctgagcttgaattcggcagaaaatgta
ttcaatgatgatacattgaaggacatggctcataaattacccacgaacaagcgtgatttt
gggaaattggctagtattactaaagaacagttgaactacttcccgcagttcaaaaagcta
ctaggcagtttgtcgaaagaacgcaaaaatcaagtgccggactcgaccccatccagtaca
acatcaccatactttggaaatcaacaagactctaatgatcctagcacgtggagaagcaca
tactcgcaaactgaaaactcaactgcgtacgtgaatatcaaaaacaaatatagcagaggt
aacagaaggtccagtcagtcaagtcaacgaggttacaaaagccaaaggggtcgcaaccag
aagactcagcggagccaacggagccagcgtgtttccaaacctagatcaaaccaaaagaac
accccaagaggtatgcctttgtga
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