Debaryomyces hansenii: DEHA2F04004g
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Entry
DEHA2F04004g CDS
T01026
Name
(RefSeq) DEHA2F04004p
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dha
Debaryomyces hansenii
Pathway
dha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHA2F04004g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2F04004g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DEHA2F04004g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DEHA2F04004g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Trypan_PARP
bZIP_1
Motif
Other DBs
NCBI-GeneID:
2903191
NCBI-ProteinID:
XP_460540
UniProt:
Q6BMN1
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Position
F:complement(359634..361454)
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AA seq
606 aa
AA seq
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MSTRKLQQEFDKTNKKIAEGLTVFDDIYDKLMTTEISSQKEKLESDLKKEIKKLQRSRDQ
LKTWISDTSIKLDKSLIQDNRTKIEHAMDQFKDLEKSSKIKQFSNEGLELQSQKTKYNKF
TDPEDAKKQEACNYIGDIIDQLNQQNESLESEIHSLATQLKKTKSANSYSVQSSIDDCKY
NVERNNNHLSKLEMILRNIENENLDPERVDDIKDDLEYYVETNQEDDYVEYDDFYDQLEM
SEENDILGSGQDANEDNEENKAEVKEGPKEEPKDGPKEEPKPETKTETKPEAKTESKRET
KPEIKSEAKSEPKSSNESTSAASTLARKGKTTVVPAANPPPLNTAQSYSNIIKASMSSPA
AAKVLPPGLNQAKSSTSSPQRTPQKLHQADDSKKRVVSQTQHIPSTQPETRSETQSPILN
VNKPIFDTVNRLSTLPQSRLHNPLPFQSIVSLLESSLLNCPDSFDAEKPRQYHPTSIHPS
SVDYPQEPMYELNSSHIMKKFDNDTLFFCFYYSEGIDNLAKWNAAQELSKRGWIFNTDVK
QWFLKDNKNGGKNRSMSIIQKEEDEQNKQDDSANNEENYKYFDYEKTWLTRRKENYKFSQ
DFRESF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtactagaaagctacaacaagagttcgataagacgaacaaaaaaattgcggaagga
ttaactgttttcgatgatatttacgataaattgatgacgactgaaattagttcccagaag
gaaaaattggaaagtgacttgaagaaggaaatcaagaagttgcagagactgagagaccaa
ttgaaaacatggattagtgacaccagtatcaagttagataaaagtttaatacaagacaac
cgtaccaaaattgaacatgctatggaccaattcaaagacttggagaagtcatctaagatc
aaacaattctccaacgaaggattggagttgcaaagccagaagacaaagtataacaaattc
acggaccccgaagacgcgaagaagcaagaagcttgtaattacatcggcgacataattgat
cagttgaaccagcagaacgagtcattggaactggagatacatctgcttgccactcaattg
aagaaaaccaaatcggcaaactcgtatagcgtacaatcgtcaattgatgattgtaagtat
aacgtggagaggaataataatcatttaagtaaattggaaatgatcttgagaaacatagaa
aacgagaacttagatcctgaacgtgtggatgatattaaagatgatttggaatactacgtt
gaaactaatcaagaagatgattatgtcgaatatgacgatttctatgatcaattagaaatg
tctgaagagaacgatattcttggttctggacaagatgcgaatgaagataatgaagaaaat
aaagcagaagtgaaagaaggaccgaaggaggaacctaaggatggaccaaaagaagaacct
aaaccagaaacaaaaactgaaactaagccagaagccaaaacggaatctaaacgtgaaact
aagccagaaatcaaaagcgaggcaaagagtgaacctaaatcgtcgaatgagtcgacttct
gctgctagtactcttgcgagaaaaggaaagactacagtcgtaccagcggcaaacccacca
cctcttaatacggctcaatcatactcaaacattatcaaggcatccatgtcatctccagca
gctgcaaaagtccttcccccaggattaaaccaagcaaagtcatcaacatcatcaccacaa
cgcacgccacagaaactccaccaagcagacgacagcaaaaagagagtagtctctcaaacc
caacatattccatccacgcagccagaaactaggtctgagacgcaactgccaattttaaat
gtaaataaacctatctttgacactgtaaacaggctatcaactttgccccaatcgaggttg
cacaatccattaccattccaatcgattgttctgttgttagaatcatctttactcaactgt
ccagactcatttgacgcagagaaaccaagacaataccaccccacaagcatccatccatcg
tcggtggactacccacaggagccaatgtatgagttgaactcgagccacataatgaagaag
tttgacaacgatacccttttcttttgcttttactacagcgagggcatcgataacctagcc
aagtggaatgctgcacaggagttgagcaaacgaggctggattttcaacactgacgtgaag
caatggttcttaaaggataataagaacggaggtaaaaatagatctatgtctataatacaa
aaggaagaagacgaacaaaacaagcaagacgattctgcaaataatgaagagaactataag
tattttgactacgagaagacgtggttaactagaagaaaggagaactataaatttagtcaa
gatttcagggagtctttttaa
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