Debaryomyces hansenii: DEHA2F06138g
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Entry
DEHA2F06138g CDS
T01026
Name
(RefSeq) DEHA2F06138p
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dha
Debaryomyces hansenii
Pathway
dha03013
Nucleocytoplasmic transport
dha03015
mRNA surveillance pathway
dha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2F06138g
09122 Translation
03013 Nucleocytoplasmic transport
DEHA2F06138g
03015 mRNA surveillance pathway
DEHA2F06138g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2F06138g
03041 Spliceosome [BR:
dha03041
]
DEHA2F06138g
Enzymes [BR:
dha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DEHA2F06138g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DEHA2F06138g
Spliceosome [BR:
dha03041
]
Complex C
Other components
EJC/TREX
DEHA2F06138g
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DEHA2F06138g
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
2903132
NCBI-ProteinID:
XP_460627
UniProt:
Q6BME5
LinkDB
All DBs
Position
F:complement(join(544121..545199,545644..545872))
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AA seq
435 aa
AA seq
DB search
MSHEGQEELLDYSDSEEIAVPTTTAPSAAAGEGANDKEADKKGSYVGIHATGFRDFLLKP
ELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEI
STLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPITRDLEKLKNKDTCPHIVVAT
PGRLHALVTEKSIRLNNIKSFVIDECDKVLEAVDMRRDVQDIFRNTPHQKQVMMFSATLS
QEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVII
FVRSTQRANELNKLLCSSNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGRGID
IERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSLVSTKDDEEVLEKIQSRFDVKIT
EFPEEGVDPSTYMNT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgaaggacaagaagagttattagactactcggattctgaagaaatcgccgtc
ccaaccaccacagcaccaagtgctgctgctggtgaaggcgccaacgacaaagaagctgat
aaaaagggttcttatgttggtattcatgccactggtttcagagatttcttattgaaacca
gaattattgagagccattggagactgtggtttcgaacatccttcagaagttcaacaagtt
tgtatcccacaatctattttaggtactgacgttttatgtcaagccaagtctggtttaggt
aagactgcagttttcgttttatctaccttacagcaattagacccagttccaggtgaaatt
tctactttggttatctgtcacactagagaattggcttaccaaatccgtaacgaatatgcc
cgtttttctaaatatatgccagatgttaagactgaagttttctacggtggtaccccaatt
accagagatttagaaaaattgaagaacaaagatacttgtcctcatattgtcgttgctact
cctggtagattacacgctttagtcaccgaaaagtccattcgtttaaacaacatcaagtct
tttgttattgatgaatgtgacaaagttttggaagctgttgacatgagaagagacgttcaa
gacattttccgtaacactcctcaccaaaaacaagttatgatgttctctgctactttatct
caagaaatccgtccagtttgtaagaaatttatgcaaaacccattggaaatttatgttgat
gatgaagctaagttgaccttacacggtttacagcaatactatattaagttagatgaaaag
gaaaagaatagaaagttgtctgatttgttagattctttagaattcaatcaagtcattatc
tttgtcagatctacccagagagctaatgaattaaacaaattattatgttcttctaatttc
ccatctattgctgttcattccggtttaccacaagaggaaagaattgaaagatacaagtct
ttcaaggaattcaacaagcgtatctgtgtttctactgatgtctttggtagaggtattgat
atcgaaagaattaacttggccattaactacgatttaccaaacgaagctgaccagtactta
cacagagttggtagagctggtagattcggtactaaaggtttagctgtttcattagtttcg
accaaggatgacgaagaagtcttagaaaaaattcaatctagattcgatgttaaaattact
gagttcccagaagaaggtgttgatccatctacttatatgaacacttag
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