Debaryomyces hansenii: DEHA2F06490g
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Entry
DEHA2F06490g CDS
T01026
Name
(RefSeq) DEHA2F06490p
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dha
Debaryomyces hansenii
Pathway
dha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2F06490g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dha03041
]
DEHA2F06490g
Spliceosome [BR:
dha03041
]
Complex B
Other components
Prp19-related factors
DEHA2F06490g
Complex C
DEHA2F06490g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
Ig_Dlec1_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
2903151
NCBI-ProteinID:
XP_460640
UniProt:
Q6BMD1
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All DBs
Position
F:575310..576389
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AA seq
359 aa
AA seq
DB search
MSDEFPAICDSCCGPDKHIKMMRQANGEECKVCTRPFTVFRWNPNNGTNKSKKTIICMTC
ARARNCCQSCMLDITYGIPLEIRDTALKMAGLEHASQIKSSNTSQNREVKAIMADKQEAK
YNNEDNDVNKSNDRSEMARDILSKLSEKLNGNTNALIKKAPKNSKTTKKNEIINVKNADI
SKILGKLPLGGSIVVPETTPELSSFFLFGFSDDIPQYIISDFCNKFGKIKSLSIVHRAKC
GYVVFTTRKAAESFATTIMENGLNKNTATPGLLILNNKYPVRVSWGKQKPLVTTNEECHK
LSLVITKVMRQLAEKDKIFEDQKITKKAKNHKTSSDANEHSSNTASTQHYKALRPDFEL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagtttcctgccatatgcgatagctgctgtggcccagacaagcatataaag
atgatgagacaagcaaatggagaagaatgtaaagtctgcaccagaccatttacagtattt
cggtggaaccctaataatggaacaaacaaatccaagaaaacgattatatgtatgacatgt
gcgagagcaagaaactgttgtcaatcgtgtatgttagatataacgtatggcataccatta
gagataagagacacggcattgaaaatggctgggcttgaacatgccctgcaaataaaatcg
tctaatacttctcaaaaccgtgaagtaaaagccattatggccgacaagcaggaagcgaag
tataataacgaagataatgatgtaaataaatcaaatgaccgaagtgaaatggcccgcgac
atacttctgaagctatcagagaaactaaacgggaatacaaatgccttgatcaaaaaggct
ccaaaaaattctaagacaacgaaaaaaaacgagataatcaatgtcaaaaatgctgatata
tcaaaaatattaggcaagttacctctaggaggcctgattgtggttccagaaaccactcca
gaactttcatcattttttcttttcggattcagtgatgatatcccgcaatacataatatca
gacttctgtaataaatttggcaagataaaatcattgtcgattgttcatcgtgctaaatgt
ggttacgtggtattcacaactaggaaagctgccgagagctttgcaactacaataatggag
aatgggctaaataagaataccgctacaccaggattgcttatattaaataacaaatatccc
gttagagtaagttggggcaagcagaagcccttagttacaacaaacgaggagtgccataaa
ttgagtttagttataaccaaggtaatgagacaattagcagaaaaagataagatatttgaa
gaccagaaaattacgaaaaaagcaaagaatcataaaacatcttcggatgcaaatgaacat
tcaagcaatacagcatctactcaacattataaggctttacgaccagattttgagctctag
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