KEGG   Debaryomyces hansenii: DEHA2F06490g
Entry
DEHA2F06490g      CDS       T01026                                 
Name
(RefSeq) DEHA2F06490p
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
dha  Debaryomyces hansenii
Pathway
dha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DEHA2F06490g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dha03041]
    DEHA2F06490g
Spliceosome [BR:dha03041]
 Complex B
  Other components
   Prp19-related factors
    DEHA2F06490g
 Complex C
    DEHA2F06490g
SSDB
Motif
Pfam: STL11_N RRM_1 Ig_Dlec1_1 RRM_3
Other DBs
NCBI-GeneID: 2903151
NCBI-ProteinID: XP_460640
UniProt: Q6BMD1
LinkDB
Position
F:575310..576389
AA seq 359 aa
MSDEFPAICDSCCGPDKHIKMMRQANGEECKVCTRPFTVFRWNPNNGTNKSKKTIICMTC
ARARNCCQSCMLDITYGIPLEIRDTALKMAGLEHASQIKSSNTSQNREVKAIMADKQEAK
YNNEDNDVNKSNDRSEMARDILSKLSEKLNGNTNALIKKAPKNSKTTKKNEIINVKNADI
SKILGKLPLGGSIVVPETTPELSSFFLFGFSDDIPQYIISDFCNKFGKIKSLSIVHRAKC
GYVVFTTRKAAESFATTIMENGLNKNTATPGLLILNNKYPVRVSWGKQKPLVTTNEECHK
LSLVITKVMRQLAEKDKIFEDQKITKKAKNHKTSSDANEHSSNTASTQHYKALRPDFEL
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgagtgacgagtttcctgccatatgcgatagctgctgtggcccagacaagcatataaag
atgatgagacaagcaaatggagaagaatgtaaagtctgcaccagaccatttacagtattt
cggtggaaccctaataatggaacaaacaaatccaagaaaacgattatatgtatgacatgt
gcgagagcaagaaactgttgtcaatcgtgtatgttagatataacgtatggcataccatta
gagataagagacacggcattgaaaatggctgggcttgaacatgccctgcaaataaaatcg
tctaatacttctcaaaaccgtgaagtaaaagccattatggccgacaagcaggaagcgaag
tataataacgaagataatgatgtaaataaatcaaatgaccgaagtgaaatggcccgcgac
atacttctgaagctatcagagaaactaaacgggaatacaaatgccttgatcaaaaaggct
ccaaaaaattctaagacaacgaaaaaaaacgagataatcaatgtcaaaaatgctgatata
tcaaaaatattaggcaagttacctctaggaggcctgattgtggttccagaaaccactcca
gaactttcatcattttttcttttcggattcagtgatgatatcccgcaatacataatatca
gacttctgtaataaatttggcaagataaaatcattgtcgattgttcatcgtgctaaatgt
ggttacgtggtattcacaactaggaaagctgccgagagctttgcaactacaataatggag
aatgggctaaataagaataccgctacaccaggattgcttatattaaataacaaatatccc
gttagagtaagttggggcaagcagaagcccttagttacaacaaacgaggagtgccataaa
ttgagtttagttataaccaaggtaatgagacaattagcagaaaaagataagatatttgaa
gaccagaaaattacgaaaaaagcaaagaatcataaaacatcttcggatgcaaatgaacat
tcaagcaatacagcatctactcaacattataaggctttacgaccagattttgagctctag

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