Debaryomyces hansenii: DEHA2F12034g
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Entry
DEHA2F12034g CDS
T01026
Name
(RefSeq) DEHA2F12034p
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dha
Debaryomyces hansenii
Pathway
dha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DEHA2F12034g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2F12034g
Enzymes [BR:
dha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DEHA2F12034g
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DEHA2F12034g
DNA repair and recombination proteins [BR:
dha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DEHA2F12034g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
2904178
NCBI-ProteinID:
XP_460888
UniProt:
Q6BLN3
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All DBs
Position
F:complement(join(1029068..1030330,1030383..1030400))
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AA seq
426 aa
AA seq
DB search
MPEVAEVAHVCALMRRNLLGFRISKVKMNNDPLLFPFLKNNPNAEQELADLQSKLTGSTV
KSVGRHGKYFWLRLSLNKESKDETGVLLMHFGMTGMIKIRNVKSHLIFMENGGDKKVLKR
LEEEKKSTGAQSKYFKKEENDEAKSSDGDSSLLEPSKNNTDIKSEDTKEIEGMNEPDEEE
WPPRFVKFEMELQTENERFDLAFVDPRRLGKVRFLSGPLVQSDNDLMKQDPLSALGPDYS
KPLEISRTEFTTGDPDPDNHGKCRLSLEEFNKLILSKKKPIKSLLLEQEFFAGVGNWVGD
EIIYHARIHPNEVLSSKIPKGDSVDSIIERLYNSLLYVCELSVRVEGDVSQFPSNWLMIY
RWGKRRKNSPKPKTDEGYEVDHVTVGGRTSCFVPKLQKMIRKSAASEIRDTKELETEEKP
RKRRKV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagtagcagaagttgcccatgtgtgtgcgttgatgaggagaaatctacttgga
ttcagaatttcgaaagttaagatgaataatgatccactcctatttccttttttgaaaaac
aatcccaatgcagagcaagaattggctgatttacagtcgaaattaacaggttccactgtt
aagtctgttgggcgacatggaaaatacttttggttacggttgagccttaacaaagaatca
aaggatgaaactggtgttttattgatgcattttggaatgacaggcatgattaaaattagg
aacgtcaaatcccacttaatatttatggaaaatggaggtgacaagaaagtgttgaagagg
ttggaagaggagaaaaagtcaactggggctcaatcgaagtatttcaagaaagaggagaat
gacgaggccaaatcgtcggatggagacagctcattattagagcctctgaaaaataataca
gatataaaactggaggacaccaaagaaatcgagggaatgaatgaacccgatgaggaagaa
tggccacccaggtttgttaaattcgaaatggaattgcaaacagaaaacgagagattcgat
cttgcttttgttgatccacgaaggttaggtaaagtgaggtttctatctggtccattggtt
caatcagataatgatttaatgaaacaagatccattgtcagcgttggggcccgattattca
aaaccacttgaaatatccaggacagaatttaccaccggagatcccgatcctgacaaccat
ggaaaatgtagattatctcttgaggaatttaacaaattaatattgtccaagaaaaagcct
attaaaagcttattacttgagcaggagttttttgctggtgtgggaaattgggtaggtgac
gagattatctaccacgccaggattcatcccaatgaagtgttgagcagtaaaataccaaaa
ggggattcagtggatagtataatcgaaagactatacaactcattattatatgtatgtgag
ttgagtgtccgcgtagaaggagatgtttctcagtttccttcaaattggctcatgatttat
agatggggtaagagacggaaaaatagtcccaaaccgaagactgatgaagggtatgaggtt
gatcatgtcacagttggcggaagaacaagttgttttgtcccaaaattacaaaagatgata
cgcaaactggctgcatccgaaattcgggataccaaggaattggaaaccgaagaaaaacca
agaaagagaagaaaagtgtag
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