Debaryomyces hansenii: DEHA2F15510g
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Entry
DEHA2F15510g CDS
T01026
Name
(RefSeq) DEHA2F15510p
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
dha
Debaryomyces hansenii
Pathway
dha03022
Basal transcription factors
dha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DEHA2F15510g
09124 Replication and repair
03420 Nucleotide excision repair
DEHA2F15510g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dha03021
]
DEHA2F15510g
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2F15510g
Transcription machinery [BR:
dha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DEHA2F15510g
DNA repair and recombination proteins [BR:
dha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DEHA2F15510g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
DUF4776
Rad50_zn_hook
LPMO_AA14
Motif
Other DBs
NCBI-GeneID:
2904162
NCBI-ProteinID:
XP_461035
UniProt:
Q6BL86
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All DBs
Position
F:1299443..1300606
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AA seq
387 aa
AA seq
DB search
MDAIADSVFTDIGSSDSPSDDPSLLTVVLDVTPQSWYKIRNQITIQEVAKSLLVFLNAHL
SLNNSNQVAFIASTPQGSKFLYPNPEKNYDEVSSKKNGEGSNLNKADSTSSLVGDGMYRQ
FRIVDEAVLEKLNEIFADISQNVDKSRSNSTLSGALSLALTYTNRMLNLDSSISTTTASA
INTTTNANSNKTSSSGTTSNSMSTGGTNTTSLTSMRSRILIVSSNDDNDIKYIPIMNTTF
AAQKMKVPIDVAKLGERDSSYLQQASDATNGVYLHIANPEGLIQTLSTAFFIEPSIRSLI
ILPTNSNVNYRASCFITGKSVNLGFVCSVCLCIMSIIPKEGKCPTCGSKFDEKILAQLRR
GVVIPVKKKRKLDSNGNGQSDNVTPEI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatagctgattctgtgtttacagatataggatcctctgattctcctagtgat
gatccatctcttttgacggtagtacttgatgttacgccccaaagttggtataagataaga
aaccagattaccatacaagaagtagcaaagtcattgcttgtattccttaatgcacatctt
tcattaaacaattctaatcaagtagcattcattgctagcacaccgcaaggttccaagttt
ttatatcctaatccggagaaaaattatgacgaagttagttcgaagaagaatggtgagggc
tcaaatttgaataaggcagattctacttcgagtttggtaggtgatggcatgtatagacag
tttagaattgtggacgaggccgtattggaaaaattgaatgaaatctttgcagacatatcc
caaaatgttgataagagtcgttcaaattcaacattatctggtgcattaagtttagccctc
acgtatacgaatagaatgcttaatttggacctgtcgatttctacaacaacggcatcagct
ataaatacaactactaatgccaactctaataaaactagctcttctggaacaacgtcaaat
tcaatgtccacgggtggaacgaatactacaagtcttacatctatgagatcaaggatttta
atagtttcatctaacgacgacaatgacatcaaatatattccaatcatgaacacaacattt
gcagcacaaaaaatgaaggtacctatagacgtagctaaattgggagaaagagactcttca
tacttacaacaagcatcagatgctactaatggtgtatacttgcatattgcaaacccagaa
ggattgattcagactctatccacagcattttttatcgaaccatcaatcagactgttaata
atacttccgactaattccaatgttaattatagagcaagttgtttcattacgggtaaatca
gtaaatctaggatttgtttgctctgtttgcttatgcataatgagtataattcctaaagaa
ggtaagtgtcccacttgcggttctaaatttgacgaaaagatattagcacaattaagaaga
ggtgttgttatccccgtaaagaagaaaagaaagcttgactcgaatggaaatggccagtct
gataatgtaacaccagaaatataa
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