KEGG   Debaryomyces hansenii: DEHA2F16082g
Entry
DEHA2F16082g      CDS       T01026                                 
Name
(RefSeq) DEHA2F16082p
  KO
K06100  symplekin
Organism
dha  Debaryomyces hansenii
Pathway
dha03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DEHA2F16082g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dha03021]
    DEHA2F16082g
   03019 Messenger RNA biogenesis [BR:dha03019]
    DEHA2F16082g
Transcription machinery [BR:dha03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     DEHA2F16082g
Messenger RNA biogenesis [BR:dha03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     DEHA2F16082g
    U7-dependent histone pre-mRNA processing factors
     DEHA2F16082g
SSDB
Motif
Pfam: SYMPK_PTA1_N FBA
Other DBs
NCBI-GeneID: 2904015
NCBI-ProteinID: XP_461058
UniProt: Q6BL63
LinkDB
Position
F:1355637..1357805
AA seq 722 aa
MTSTPSNEVIEQLNQARNLAFSSKETFPQVLRQILQFASNPDIQIQRWCSKFFKESFLAD
ETVLSRADKVDLAIDSIDSLIILLEIRDAEIFKDCIDTAIVVFRLVFRYVAENDGCGDVW
QKLNELKNTLTNKFQSTFPLAPSDDEEHDMVRSIDSKLEILKFVILVIDYQSKSPSNITS
FSLSQVPPNHSLIKQSIEAEAYGLVDVVLKVITNDILIPPLVTAVFNHFSVLARRKPQFV
SKMLNVIENFDTNTKLQSNYQTIDEYKLSKKYVDRILRIFLNHLLRNQLVPSNYTSSLNK
KLSLLVNRGDDIRKKNILSPSPEDSNIKKRKFDGFVNPSKRCKTNDYKNLYCLTDSTNEL
NNFDIATLPQNMLISMTLASLNKVSTNKLNKALDIIGERYKYAVANFSPTEIKKEQEGEY
DDEDNDGDDFSPETNYTLPPPKDLSYQDKKEHINLIIKNFFKLADKNVSDVEEKQELGGK
DTVTKELTKIAIKAWKKDSWFVLLTRLATRGMRTVDSTKTVIGSEKVENESTDVAQNEEL
SDLIRQSIFDHFLDNVHSRIDLIIEWLNEEWYSEKVFNEDVVYKQLTEKYIEEYESNPVE
NDSVEERVNREIDNIEIPTPTYNKWTGKVLDSLIPFLEPNDKKIFIRLLSDLPYLNEDLV
SRIKSLCFDPVRSKIGFLSLQFLIMYRPPVKSACIHILEDLSNSDQEDLKEEATKLLKKY
EQ
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgacaagcacacctagtaatgaggtgattgaacaattgaatcaggcccgtaatttagcg
ttttcgagtaaagaaacatttccacaggtattaagacaaatcttgcaatttgcaagcaat
ccagatatccagatccaaagatggtgttctaaattctttaaggaatcgtttttggctgac
gaaacagtgttaagcagagccgataaggttgacttggcgatagactcgatcgacagtttg
ataatcttgttagaaattcgtgatgcggaaatatttaaagattgtattgatacagcgata
gtagtatttagactagtatttcgctacgttgctgaaaacgatggatgtggtgatgtatgg
cagaaattgaatgagttaaagaatacgttaactaataagtttcaaagcacatttcctcta
gcaccatctgacgatgaagaacatgatatggtacgcagcatagattctaagttggaaatc
ttgaaatttgtgatactagtaattgactatcagtctaaatccccctccaatataaccagc
ttttctttgtcacaagtcccaccaaatcattcactcatcaaacagtcaatagaggctgaa
gcatacggcctagtggacgtagtgttgaaagttattaccaatgatatactcataccgcca
ttggtcactgccgtatttaaccatttttcagttctagcaagaagaaaaccccaattcgtt
tcaaaaatgttaaatgtgatagagaattttgacaccaatacaaaattacagtcaaattat
cagacgatcgatgaatataagctatctaaaaaatatgttgatagaatcttgagaattttc
ttaaaccatctattaaggaaccagctagtgccttccaattacacttcttcattaaataaa
aaattatcactcttggtgaatcgcggtgacgatatcagaaagaaaaacatattactgcca
tcaccagaagattcgaatattaagaaacgtaaatttgacggatttgttaatccatcaaaa
aggtgcaagacaaacgactacaaaaatttgtattgcttaactgactcaaccaacgaatta
aataattttgatatagcaacacttccacaaaacatgttgatatcaatgacattggcatct
cttaacaaggtaagcactaacaaattgaacaaagcgttggatattattggtgagagatat
aaatatgcggtggctaacttttcgcctacagaaattaaaaaagagcaggagggagagtac
gatgatgaagataatgatggtgatgacttcagcccagaaactaactataccttaccacca
ccaaaagacctttcataccaagataagaaagaacatattaatttgattataaagaacttt
ttcaaattagctgataaaaacgtatctgatgttgaagaaaaacaagagttgggtggtaag
gataccgtaactaaagaattaacaaagatcgccatcaaagcgtggaaaaaggattcttgg
tttgtattattgacaagattagccactcgtggtatgagaacagttgattctacaaagaca
gttataggttcagaaaaggttgaaaatgaaagcactgatgttgctcaaaacgaggaattg
agtgatctaattagacaatctattttcgaccacttcctcgataatgtacactcaagaata
gacttaatcattgagtggctcaatgaagagtggtacagcgagaaggtattcaacgaagac
gtggtgtacaaacaattaacagaaaaatatattgaggaatatgaatcaaatcctgttgaa
aatgattcagttgaagagagagttaatagagaaatcgataatatagagattccaacccca
acttacaacaaatggactggtaaggttttagactccttaattccatttttggaaccaaac
gataagaaaatatttatcagattattatctgacttaccctacttaaatgaagatttagtg
tcgagaatcaaatcgttgtgttttgacccagttaggtctaaaatcgggtttttgtctttg
caattcttaatcatgtacagacctcccgtaaaactggcatgcatacatattctcgaagac
ctctcgaacagtgaccaagaggaccttaaagaagaggcaactaaattattgaaaaaatat
gaacaatag

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