Debaryomyces hansenii: DEHA2F16082g
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Entry
DEHA2F16082g CDS
T01026
Name
(RefSeq) DEHA2F16082p
KO
K06100
symplekin
Organism
dha
Debaryomyces hansenii
Pathway
dha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DEHA2F16082g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dha03021
]
DEHA2F16082g
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2F16082g
Transcription machinery [BR:
dha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DEHA2F16082g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DEHA2F16082g
U7-dependent histone pre-mRNA processing factors
DEHA2F16082g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
FBA
Motif
Other DBs
NCBI-GeneID:
2904015
NCBI-ProteinID:
XP_461058
UniProt:
Q6BL63
LinkDB
All DBs
Position
F:1355637..1357805
Genome browser
AA seq
722 aa
AA seq
DB search
MTSTPSNEVIEQLNQARNLAFSSKETFPQVLRQILQFASNPDIQIQRWCSKFFKESFLAD
ETVLSRADKVDLAIDSIDSLIILLEIRDAEIFKDCIDTAIVVFRLVFRYVAENDGCGDVW
QKLNELKNTLTNKFQSTFPLAPSDDEEHDMVRSIDSKLEILKFVILVIDYQSKSPSNITS
FSLSQVPPNHSLIKQSIEAEAYGLVDVVLKVITNDILIPPLVTAVFNHFSVLARRKPQFV
SKMLNVIENFDTNTKLQSNYQTIDEYKLSKKYVDRILRIFLNHLLRNQLVPSNYTSSLNK
KLSLLVNRGDDIRKKNILSPSPEDSNIKKRKFDGFVNPSKRCKTNDYKNLYCLTDSTNEL
NNFDIATLPQNMLISMTLASLNKVSTNKLNKALDIIGERYKYAVANFSPTEIKKEQEGEY
DDEDNDGDDFSPETNYTLPPPKDLSYQDKKEHINLIIKNFFKLADKNVSDVEEKQELGGK
DTVTKELTKIAIKAWKKDSWFVLLTRLATRGMRTVDSTKTVIGSEKVENESTDVAQNEEL
SDLIRQSIFDHFLDNVHSRIDLIIEWLNEEWYSEKVFNEDVVYKQLTEKYIEEYESNPVE
NDSVEERVNREIDNIEIPTPTYNKWTGKVLDSLIPFLEPNDKKIFIRLLSDLPYLNEDLV
SRIKSLCFDPVRSKIGFLSLQFLIMYRPPVKSACIHILEDLSNSDQEDLKEEATKLLKKY
EQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcacacctagtaatgaggtgattgaacaattgaatcaggcccgtaatttagcg
ttttcgagtaaagaaacatttccacaggtattaagacaaatcttgcaatttgcaagcaat
ccagatatccagatccaaagatggtgttctaaattctttaaggaatcgtttttggctgac
gaaacagtgttaagcagagccgataaggttgacttggcgatagactcgatcgacagtttg
ataatcttgttagaaattcgtgatgcggaaatatttaaagattgtattgatacagcgata
gtagtatttagactagtatttcgctacgttgctgaaaacgatggatgtggtgatgtatgg
cagaaattgaatgagttaaagaatacgttaactaataagtttcaaagcacatttcctcta
gcaccatctgacgatgaagaacatgatatggtacgcagcatagattctaagttggaaatc
ttgaaatttgtgatactagtaattgactatcagtctaaatccccctccaatataaccagc
ttttctttgtcacaagtcccaccaaatcattcactcatcaaacagtcaatagaggctgaa
gcatacggcctagtggacgtagtgttgaaagttattaccaatgatatactcataccgcca
ttggtcactgccgtatttaaccatttttcagttctagcaagaagaaaaccccaattcgtt
tcaaaaatgttaaatgtgatagagaattttgacaccaatacaaaattacagtcaaattat
cagacgatcgatgaatataagctatctaaaaaatatgttgatagaatcttgagaattttc
ttaaaccatctattaaggaaccagctagtgccttccaattacacttcttcattaaataaa
aaattatcactcttggtgaatcgcggtgacgatatcagaaagaaaaacatattactgcca
tcaccagaagattcgaatattaagaaacgtaaatttgacggatttgttaatccatcaaaa
aggtgcaagacaaacgactacaaaaatttgtattgcttaactgactcaaccaacgaatta
aataattttgatatagcaacacttccacaaaacatgttgatatcaatgacattggcatct
cttaacaaggtaagcactaacaaattgaacaaagcgttggatattattggtgagagatat
aaatatgcggtggctaacttttcgcctacagaaattaaaaaagagcaggagggagagtac
gatgatgaagataatgatggtgatgacttcagcccagaaactaactataccttaccacca
ccaaaagacctttcataccaagataagaaagaacatattaatttgattataaagaacttt
ttcaaattagctgataaaaacgtatctgatgttgaagaaaaacaagagttgggtggtaag
gataccgtaactaaagaattaacaaagatcgccatcaaagcgtggaaaaaggattcttgg
tttgtattattgacaagattagccactcgtggtatgagaacagttgattctacaaagaca
gttataggttcagaaaaggttgaaaatgaaagcactgatgttgctcaaaacgaggaattg
agtgatctaattagacaatctattttcgaccacttcctcgataatgtacactcaagaata
gacttaatcattgagtggctcaatgaagagtggtacagcgagaaggtattcaacgaagac
gtggtgtacaaacaattaacagaaaaatatattgaggaatatgaatcaaatcctgttgaa
aatgattcagttgaagagagagttaatagagaaatcgataatatagagattccaacccca
acttacaacaaatggactggtaaggttttagactccttaattccatttttggaaccaaac
gataagaaaatatttatcagattattatctgacttaccctacttaaatgaagatttagtg
tcgagaatcaaatcgttgtgttttgacccagttaggtctaaaatcgggtttttgtctttg
caattcttaatcatgtacagacctcccgtaaaactggcatgcatacatattctcgaagac
ctctcgaacagtgaccaagaggaccttaaagaagaggcaactaaattattgaaaaaatat
gaacaatag
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