Debaryomyces hansenii: DEHA2G03168g
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Entry
DEHA2G03168g CDS
T01026
Name
(RefSeq) DEHA2G03168p
KO
K14408
cleavage stimulation factor subunit 3
Organism
dha
Debaryomyces hansenii
Pathway
dha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DEHA2G03168g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2G03168g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DEHA2G03168g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
2904551
NCBI-ProteinID:
XP_461683
UniProt:
Q6BJD8
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Position
G:complement(join(273858..275879,276157..276357))
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AA seq
740 aa
AA seq
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MPSNMFIQADKKKRLSLDVIGQLEDDLEADPLDYNKWNKLIQQVLAKDKEEQVKSVFNKY
LNIFNFDQWCNYINYQLNRGEFQEVEQLFSKCLPITDHVELCRLYVSYVRRTNDVITGGE
KARGIVVQAFEFAVTKVGIDISSGDLWNDYLDFLKAWTPAATWEQQQKTDLIRRVYKRFL
VIPTEKIEQVWSTYTKWENEVNASSANKFIAEKSSEFMDARSWNTEWHNATERSLRREVI
PIGIHNDNNNLVHTQLQLWYKWIALERENKLNLKDDSSVQQRIEYVYKQAIMALPFVPEL
WFKFNKFWLRSNEEANSNKCIELLNEALVLNPRSYLLTFQLSEMYEKDNTINKATETYDN
LITFLTNDYNNINNQIESITNRELNNKKQEENTGEENNNENDDSDNDDNDDDDSFKNPTF
QLSEEDALLLSKLQEKKDELNKAITLVYTKLMMACKRSRGIKEARGVFKQARNNFEAIGY
EFYVENALMEYHSDNLKTASKIFELGMKHFKKQGEFLLAYLDFLIMINKGESIKVLFEQG
LTALLQDVNIENENSNGDITSGANMRLQESKSKENIKKKNCIKKLIKKFSRYQSVYGDLD
LIKSLDSRYEEYFPDDDSIELFSDRYRGHSIDVIKHFDLGKEDTSHEEIDTTAQETKRRK
IQNPTVDEFTPEVSNNNNQHTNNKDAVQNQQQPQNFVGNTIYNLLRVLPNSSYFGPPSDH
LFNNTKLVELFGNLPNVPTE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaatatgtttatccaagctgataagaagaagagattgtcgttggatgttatc
gggcaactagaagatgatttagaggctgatccattggattataacaaatggaataaatta
atccaacaggtccttgctaaggataaagaggagcaagtgaagtctgtgtttaacaaatat
ttgaatattttcaattttgaccaatggtgtaattatatcaactaccaattgaatagaggt
gaatttcaagaagttgaacaattattctcgaaatgccttcctataactgatcacgttgaa
ttgtgccgcctatatgtttcgtacgtccgtcgtaccaatgatgtgattactggaggagaa
aaagctcgtggtattgtggttcaggcttttgaattcgcagttactaaagttggtatagat
ataagtagtggtgatttatggaatgattatttggatttcttaaaggcgtggacgccggcg
gcaacttgggaacaacaacagaagacagacttgataaggagagtctataagaggttttta
gtaatcccaacagagaaaatagaacaagtctggtccacatatacaaaatgggaaaatgaa
gttaatgcttcttccgctaataaattcattgcagaaaaatcgagtgaatttatggatgct
agatcgtggaatacagaatggcataatgcaaccgaaaggctgttacgtagagaagttata
cctattggaatccataatgataataacaatttagtacatactcaacttcaattatggtac
aagtggattgctcttgaacgggaaaataagttgaatttaaaagacgattcttcggttcag
caaagaatcgaatatgtctataaacaagcaattatggctttgccatttgttccagaattg
tggtttaaatttaataagttttggttgcgcagtaacgaagaagctaattctaataaatgc
attgaacttttaaacgaagctttagtattaaaccctagaagttacttattaacttttcaa
ttatcagaaatgtatgaaaaagataacactattaataaagccacagaaacttacgataat
ttaataacctttttaacaaacgattataacaatataaacaatcaaattgaatcaattaca
aacagagaacttaataataaaaaacaagaagagaatactggagaagagaataataatgaa
aacgatgatagtgacaatgatgacaacgacgatgatgatagttttaaaaaccccacattc
cagcttagtgaagaggatgctttacttttatcaaaattacaggaaaagaaagatgaattg
aacaaggcaataactttggtttacacaaaattgatgatggcttgcaaaagatcaaggggt
attaaggaagcccgtggtgtatttaaacaagcaagaaacaattttgaagctatagggtat
gaattttacgttgagaacgctctaatggagtatcattcggataacttgaagacagccagt
aaaatttttgaattgggaatgaaacatttcaaaaaacaaggtgagttcttattagcatat
ttagacttcttaattatgatcaataagggtgaaagtattaaggttttgttcgaacaaggt
ttgacagctctattgcaagatgtgaatattgaaaacgagaatctgaatggtgatattact
tcaggcgctaatatgaggttacaagagagtaaaagtaaggagaatatcaaaaagaagaat
tgcattaagaaattaatcaagaagttttcgagataccagagtgtgtatggagatttagac
ttgattaaaagtttggatagtagatatgaagaatatttcccagatgatgactctatagaa
ttatttagtgacagataccgtggtcattctatcgatgtaattaaacatttcgatttaggg
aaagaagatactagtcatgaagaaatcgataccaccgctcaagagacgaagagacggaag
attcagaatcctacagtagatgaatttactccggaagtttcgaataacaataatcaacat
accaacaataaagatgctgtacaaaatcagcaacaaccccagaattttgttggtaatacg
atctacaatttgcttcgtgtattgcctaactcatcgtattttggtccaccttcagatcac
ctattcaataatactaaactagtcgagcttttcggcaatttaccaaatgtacctactgaa
tag
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