KEGG   Debaryomyces hansenii: DEHA2G05192g
Entry
DEHA2G05192g      CDS       T01026                                 
Name
(RefSeq) DEHA2G05192p
  KO
K11097  small nuclear ribonucleoprotein E
Organism
dha  Debaryomyces hansenii
Pathway
dha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DEHA2G05192g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dha03019]
    DEHA2G05192g
   03041 Spliceosome [BR:dha03041]
    DEHA2G05192g
   03032 DNA replication proteins [BR:dha03032]
    DEHA2G05192g
Messenger RNA biogenesis [BR:dha03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     DEHA2G05192g
Spliceosome [BR:dha03041]
 Complex A
  U1 snRNP components
   Sm proteins
    DEHA2G05192g
  U2 snRNP components
    DEHA2G05192g
 Complex B
  U1 snRNP components
    DEHA2G05192g
  U4/U6.U5 tri-snRNP components
    DEHA2G05192g
 Complex C
  U2 snRNP components
    DEHA2G05192g
DNA replication proteins [BR:dha03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     DEHA2G05192g
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 2904648
NCBI-ProteinID: XP_461772
UniProt: Q6BJ49
LinkDB
Position
G:complement(441958..442230)
AA seq 90 aa
MSSSAKTNKKTMIPPINLIFKYLQQQSPVTIWLYEQTHSRIQGKIRGFDEFMNVVIDDAM
EVNTNDGSKEELGRILLKGDNITLISSLDV
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtcttcaagtgctaagacaaataagaaaacgatgattcctccaatcaatcttattttt
aaatatttacagcaacaatcaccagttacaatatggttatatgaacaaactcatctgaga
atacaaggaaagataagagggtttgacgagtttatgaacgttgtaattgatgacgctatg
gaggtgaatacaaacgacgggtcaaaagaagaattagggaggatactacttaaaggtgat
aacattacgttaatttctagcttggatgtgtag

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