Debaryomyces hansenii: DEHA2G05258g
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Entry
DEHA2G05258g CDS
T01026
Name
(RefSeq) DEHA2G05258p
KO
K14315
nucleoporin NDC1
Organism
dha
Debaryomyces hansenii
Pathway
dha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DEHA2G05258g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2G05258g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DEHA2G05258g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
2904651
NCBI-ProteinID:
XP_461775
UniProt:
Q6BJ46
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All DBs
Position
G:445702..447684
Genome browser
AA seq
660 aa
AA seq
DB search
MSFRPRSISSTTKKAASYQSYFAKVLAKRLKYLNNINAFLAIIISISLKVPYGKFWWNFL
LTFILRGPLIFVALFTIKLARDNNATVEFSPYKTLGLQVAKTLISRRFVLNSIFYGISTY
IFTSIFIFQLPFTFDYYLLSKEYQSKPLVNDEWVYYWFYSFYLAIAYSAQHLIFQRNRLQ
FQYGVTKLKPEDALLKKIPKLVGNTIVLNSIICLSGPVVYFLIRSFIYKLNWFVLVIMGL
DSNIPNYRVSMKTVIHLSYVSAHIIFSWEVVNRIYNVYATIGCLDGSKPISTYSADPINT
LLSGVRNVDPENQLSRLTAYQELAYISTTNDLEGVKLRNAIYNAHSRGGFIWPAILDECS
LIIKETTSKINYRSGSDMKALKQNQISVKDDFRTSLKSSDEIFGNSFTLSPTPNSQSSPI
PNMKKYDEQSENKQNANINNIKYSPIYNFFELQIWTPIKTILSSHISFTTNETSKTYFHN
CFANIINEVKKLYSEYRNHFLTTHIGVFFRITIKRDTESRVVNPVNYGNAVIAITNLVIH
AIEEDKNSTISSNHISEILTLLERPIRASSNYTDLLPASVYLTQAQKRDKKLTKNHLIAL
LHDLTMNEFFQVCIKYNYKLNDLVLSSRAFKLAKWVIDVAIAQQQQKHKGKQGAALSMQL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaggccaaggtcaatctcgctgactaccaaaaaggctgcatcatatcaatcg
tactttgccaaagtcctagcaaagagattgaagtatttaaataatatcaatgccttcttg
gctattattatttctatcagtttaaaggtaccatatggtaaattctggtggaacttttta
ttaacgtttattttgcgtggcccattgatatttgttgcattatttacaatcaaacttgct
agagataacaatgcaactgtcgaattttcgccatacaaaacattgggtttgcaagttgct
aaaaccttgatatcaagaagatttgtcttgaattcaattttctatggtatatcaacatat
atcttcacatcaatattcatattccaattgccattcacgtttgattattatcttctttca
aaagaatatcaactgaaacccttagttaacgatgaatgggtatattattggttctattca
ttttaccttgcaattgcttacagtgcccaacatttgatctttcagcgtaatagattgcag
ttccaatacggcgtcactaagcttaagccagaagatgccttattgaagaaaattccgaag
ttagtgggaaatactattgtgcttaattcaataatttgtcttagtgggccagttgtatac
tttttaatcagatcttttatttacaaattaaactggtttgttttagttataatggggttg
gattcaaatattcctaactatcgtgtttctatgaagactgtgattcatctctcttacgtt
tcggcacacattatattttcatgggaagtggtaaaccgtatttataatgtgtatgctacg
attggctgcttggatggaagtaagcctatcagtacatatagcgctgaccctattaataca
ttactttcgggtgtccgcaatgttgaccctgaaaatcaattgagtcgcttaacagcttac
caagaattagcgtatatttcaacgactaatgatcttgaaggagtcaaacttagaaacgct
atttataatgcacattccagaggaggatttatttggcctgccattttggatgaatgttcg
ttgattattaaagagacaaccctgaaaattaattatcgttctggtagtgatatgaaagct
ttaaagcaaaaccaaatatccgtcaaagatgatttccgtacttcattaaaatctagcgac
gaaatatttggaaattcatttactttgagcccaaccccaaattcgcaatcttcacctatc
ccaaatatgaaaaaatatgatgaacagctggaaaataaacaaaatgccaacataaacaat
ataaaatactcccccatatataacttttttgagctacagatttggacccctatcaaaaca
attttgtcttcgcatattagcttcacaactaatgaaacttcgaaaacatatttccacaat
tgctttgcgaatatcataaacgaggtaaagaaactctactctgagtaccgtaaccacttc
ctcacaactcacataggagtattttttagaataactattaaaagggatacagagtctagg
gttgtgaatcctgtcaattatggcaatgcagtaattgccattacaaatttggtcatacat
gcaatagaagaagacaagaactctactatctcaagcaatcatatttctgagattctaact
cttcttgaaaggccaattagagctagtagcaattatactgacttacttcctgccagtgtt
tatttaacacaagcacagaagagggataaaaaattgacgaagaaccatttgatagctttg
ctacatgatttgacaatgaatgaatttttccaagtttgtattaagtataattacaagtta
aatgatttggtcttgtcatcaagagccttcaagttagctaaatgggttattgatgtcgct
atcgctcagcaacaacaaaagcataaaggtaagcaaggagcagctttaagtatgcaactt
tag
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