Debaryomyces hansenii: DEHA2G06886g
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Entry
DEHA2G06886g CDS
T01026
Name
(RefSeq) DEHA2G06886p
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
dha
Debaryomyces hansenii
Pathway
dha03018
RNA degradation
dha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2G06886g
09123 Folding, sorting and degradation
03018 RNA degradation
DEHA2G06886g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2G06886g
03041 Spliceosome [BR:
dha03041
]
DEHA2G06886g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DEHA2G06886g
mRNA degradation factors
5'-3' decay
Lsm complex
DEHA2G06886g
Spliceosome [BR:
dha03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
DEHA2G06886g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
2904726
NCBI-ProteinID:
XP_461847
UniProt:
Q6BIX4
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All DBs
Position
G:complement(join(599933..600204,600259..600286))
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AA seq
99 aa
AA seq
DB search
MSSLKEFLEKKVRVITTDARLFEGTLQGFDNSTNVIINNCIERLIYPDEQDDNQEIPLGL
YLMRGGNIVCIGEVDDTIEADIDWMKVKGETLKGTKNPL
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcttaaagagttcttagagaaaaaagttagagtgataacaacagatgctagg
ttattcgaaggaacactccaaggattcgataattcaacaaacgttatcattaacaattgc
atagaaagattaatttatcctgacgaacaagatgataatcaggaaataccgttgggacta
tatttgatgcgagggggaaatattgtttgtattggagaggtagatgatacaatagaagct
gatatagattggatgaaagtcaaaggagagacattaaagggaacaaagaatccgttataa
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