Debaryomyces hansenii: DEHA2G09482g
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Entry
DEHA2G09482g CDS
T01026
Name
(RefSeq) DEHA2G09482p
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
dha
Debaryomyces hansenii
Pathway
dha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHA2G09482g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2G09482g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
DEHA2G09482g
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_CSD1
Rrp44_S1
PIN_4
OB_Dis3
CSD2
OB_HELZ2
OB_RNB
DUF4862
Dis3l2_C_term
DUF3368
DUF3246
Motif
Other DBs
NCBI-GeneID:
2904848
NCBI-ProteinID:
XP_461958
UniProt:
Q6BIL3
LinkDB
All DBs
Position
G:794528..797566
Genome browser
AA seq
1012 aa
AA seq
DB search
MRLKNQNILCISNITVYNSPRMIQDRKRLSSGLTVTSKVFVRSRNGGATKIVREHYLRND
IPCYSKLCNKCQLDLKPDSHGQLPQFILSEEPQKLGKGQRHYIVLDTNIILHAIDLLENN
ECFFDVVIPQTVLDEVKNRSFPIYQRIRSLVKSEEKRFVVFHNEFCESTYVNREKNESIN
DRNDRAIRKFCSWFKGHLNEDNSKIPISIVLICNDKDNREKAKKEGTDARALAEYIEALP
NADDLRDLVPNEHESFAGSETINETSFPEYYSTSRIMGGVKNGTLYQGMLNISTYNFLEG
TVQVPAFKKPLLILGTKQLNRAFNGDSVIVELLPKDKWREPSTTIIEESNIGVNDNADDE
DDENDVENTGIIPDKERQLLAQEAMKVTSVSNDDDKSKRLQPTAKVVGIMRRSWRYYVGQ
IAPSSVSKDHDTGNVSKNCFVILMDKVLPKIRIRTRKSKELLGQRIVIAVDSWPSTSKYP
QGHFVRSLGEIESAEAETEALLLEHDVEYRPFSKNVLDCLPEEGTNWTVPQNLDNGDEQL
AKRKDLRDKLVCSIDPPGCVDIDDALHAQKLPNGNYEVGVHIADVTHFVRPNTALDNEGA
ARGTSVYLVDKRIDMLPMLLGTNLCSLRPFVERYAFSVIWELDEDANIVNVNYMKSIIKS
REAFSYEQAQLRIDDKSQTDELTKSMRILLNLSKKLKQKRLDAGALNLASPEVKVHMDSE
TSDPGEVEIKKLLETNSLVEEFMLFANISVARKIFDAYPQTAMLRRHAPPPATNFETLNE
MLRIRKTGMSVSLESSKSLADSLDRCNDPKDPYFNTLLRILSTRCMMAAEYFPSSSYGYP
EFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKNKMELIVKNINRR
HRNAQFAGRASIEYYVGQVMRNNESTQEGYVIKCFNNGIVVLVPKFGVEGLIKLDMLGDA
NSAEYNEDKFELTFTDFSGKKRCVGVFDKVTVNIKSIKDEITGKRKAQLMLQ
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaaagaatcaaaatattctttgtattagtaacattacagtatataatagtcca
agaatgattcaagacagaaaaagactttcgagtgggcttactgtaacatcgaaagtattt
gttcgatcgagaaacggtggagctacaaaaattgtaagagaacattatttgagaaacgat
attccatgctactctaagctatgcaacaaatgtcaacttgatttgaaaccagattcacat
ggacagttaccgcaattcatcttatctgaggagccacagaagctcggtaagggacaacgt
cattatatcgttttagataccaacattatattgcatgctattgatttgttagagaataat
gagtgtttttttgatgtggtaattccacaaactgtgttggatgaagttaagaatagatcg
tttcctatttatcagaggataaggtcattggttaagtctgaggagaagagatttgtggtt
tttcataatgaattctgtgaatctacgtacgtaaatcgtgaaaaaaatgagtctataaat
gatcgtaatgatagagcaattcgaaaattctgttcgtggttcaaaggtcatcttaatgaa
gataactcgaagattccaatcagtattgtcttgatatgtaacgataaggataatcgtgag
aaggctaagaaggagggcactgatgcaagagcgttggctgaatatattgaagcattaccc
aacgcagatgacttacgggatttggttccaaacgaacatgaatcatttgcgggttccgag
actataaacgaaacttcattcccagaatattattcgacatcgagaattatgggtggtgtt
aaaaatggtactttatatcaaggtatgcttaacatatccacttacaatttcttggaagga
actgtacaagttccagctttcaagaagccattattaattcttggaacaaaacaattaaat
agagctttcaatggagattctgttattgtcgaattattgccaaaagataaatggagagaa
ccatctacaacgattattgaagagtctaatattggggttaatgataatgctgatgatgag
gatgatgaaaatgatgttgaaaatacaggaattattccagataaagaacgtcaacttttg
gcacaagaagcaatgaaagtgacatcagtgtcgaatgatgatgataaactgaagagactt
caaccaacagccaaggttgtgggtataatgagaagatcgtggagatattatgttggtcag
attgctccatcatctgtctctaaagatcatgacacgggaaatgtatcgaagaattgtttt
gtcatattgatggataaggtcttacctaaaattaggatccgtacaagaaaatcgaaagaa
ttattaggtcaaagaattgttatcgcagttgactcatggccatcgacttcgaaataccca
caaggacatttcgtaagaagtttaggtgaaattgaaagtgcagaagcagaaacagaagct
ttattgttagagcatgatgttgaatatagaccattttctaaaaatgtgttggattgtttg
ccagaagagggaacaaattggactgttccacagaatcttgataatggtgatgaacagtta
gctaaaagaaaggatttgagagataagttggtttgttctattgatccaccaggttgtgtt
gacattgatgatgcattgcatgctcagaaattacctaatggaaattatgaggttggtgtt
catattgcagatgttactcattttgttcgtccaaatactgcattagacaacgaaggtgct
gcgagaggtacctcagtctatttggtagataagagaattgatatgttaccaatgttatta
ggtacaaatttgtgttccttaagaccatttgtcgaaagatatgctttctcggtcatttgg
gaattagatgaagacgctaatatcgtgaacgttaattatatgaaatctattataaaatca
agggaggcattctcgtatgaacaagcacaattaagaatcgatgacaagtctcaaactgat
gaattaacgaaatcaatgagaatcttattaaacttatctaaaaagttgaagcaaaaaaga
ttagacgcgggtgcattgaacttggcttcaccagaagttaaagttcatatggatagcgaa
acgtcggatcctggtgaagttgaaattaagaaattactcgaaactaattcattagttgaa
gagtttatgttgtttgcaaatatatctgttgcaagaaaaatctttgatgcgtatccacaa
actgcaatgttaagaagacatgcaccaccaccagctactaattttgagactttaaatgaa
atgttaagaattcgtaaaacaggcatgtcagtttcgttggaatcatctaagtctttagct
gactccttggaccgttgcaatgatccaaaagatccatactttaatacgttgttgcgtatt
ttatccactagatgtatgatggcggcagaatatttcccatcgagctcgtatggataccca
gaatttagacattatggtttagctgttgatatctatacccatttcacatccccaattaga
aggtactgtgatgtggttgctcatagacaactagcaggtgcaattggttatgaaaactta
gatttaagtcatagagataaaaataagatggaacttattgttaaaaacatcaacagacgt
catagaaatgctcagtttgctggaagagcaagtattgaatattacgttggacaagtcatg
agaaataatgagtctacccaggaaggttacgtcatcaaatgttttaataacggtattgtt
gttttagttccaaagttcggggtggaaggtttaatcaaattagatatgctaggtgatgca
aattctgcagagtataatgaagataagtttgaattaacatttactgacttctctggaaag
aagagatgtgtcggtgttttcgataaagttacagttaacattaagtcaattaaggatgaa
attactggtaaaagaaaggctcaattgatgttgcaataa
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