KEGG   Debaryomyces hansenii: DEHA2G09988g
Entry
DEHA2G09988g      CDS       T01026                                 
Name
(RefSeq) DEHA2G09988p
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
dha  Debaryomyces hansenii
Pathway
dha03020  RNA polymerase
dha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DEHA2G09988g
  09124 Replication and repair
   03420 Nucleotide excision repair
    DEHA2G09988g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dha03021]
    DEHA2G09988g
   03400 DNA repair and recombination proteins [BR:dha03400]
    DEHA2G09988g
Transcription machinery [BR:dha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DEHA2G09988g
  RNA polymerase III system
   RNA polymerase III
     DEHA2G09988g
  RNA polymerase I system
   RNA polymerase I
     DEHA2G09988g
DNA repair and recombination proteins [BR:dha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DEHA2G09988g
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Sof1 SH3_2 Mrr_cat AAA_3
Other DBs
NCBI-GeneID: 2904874
NCBI-ProteinID: XP_461981
UniProt: Q6BIJ0
LinkDB
Position
G:join(843675..843749,843813..844382)
AA seq 214 aa
MEDTDRTISRLWRSFKTVKEMVRDRGYYITQEEIDMSLAEFRSRICDSMNVPQRKLMCFQ
ANPTAESLEKFPDLGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQSSITPSAN
KLIPTVSPASIETFQEGDLVVNITHHDLVPKHIKLARDEKKELLERYRLKESQLPRIQRE
DPVGRYLGLKRGEVVKIIRRSETSGRYASYRICL
NT seq 645 nt   +upstreamnt  +downstreamnt
atggaagacactgatagaaccatctcccgtttatggagatcatttaaaaccgtcaaggaa
atggtcagggacagaggatactacatcacacaagaagaaatcgatatgtcattagctgaa
ttcagatccaggatttgtgatagtatgaacgttccacaaagaaagttgatgtgtttccaa
gcaaacccaactgctgaatcattggaaaaatttccagatttaggatcattatgggttgaa
ttctgtgacgaggcttccgttggtattaagaccatgagaaatttctgtatccacatcagt
gaaaagaacttcagtacagggatctttatttaccaatcatccatcacccctagtgccaac
aagttgattcctaccgtttcaccagcatcgattgagactttccaggaaggtgatttagta
gttaacatcacacatcacgatttggttccaaagcatatcaagttagccagagacgaaaag
aaagaattattagaaagatatagattgaaggaatcacaattgcctagaattcaaagagaa
gatccagtcggtcggtacttgggattgaaaagaggtgaagtagtcaaaatcattaggaga
tccgaaacctcgggtcgttatgcttcctatagaatttgtttgtaa

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