Debaryomyces hansenii: DEHA2G12474g
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Entry
DEHA2G12474g CDS
T01026
Name
(RefSeq) DEHA2G12474p
KO
K13126
polyadenylate-binding protein
Organism
dha
Debaryomyces hansenii
Pathway
dha03015
mRNA surveillance pathway
dha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DEHA2G12474g
09123 Folding, sorting and degradation
03018 RNA degradation
DEHA2G12474g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2G12474g
03041 Spliceosome [BR:
dha03041
]
DEHA2G12474g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
DEHA2G12474g
mRNA cycle factors
Stress granule specific factors
DEHA2G12474g
Spliceosome [BR:
dha03041
]
Complex C
Other components
Complex C specific factors
DEHA2G12474g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_10
RRM_5
RRM_7
RBD_DEAH11
YflT
RRM_MARF1
RRM_3
Motif
Other DBs
NCBI-GeneID:
8999193
NCBI-ProteinID:
XP_002770625
UniProt:
Q6BI95
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All DBs
Position
G:complement(1029230..1031113)
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AA seq
627 aa
AA seq
DB search
MSAADANQVQESLEKLNLDSAPVASTEETEQTASGETEEAADSAQVSDTSASLYVGELNP
SVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGR
PCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKC
FGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNID
LDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQ
KIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGS
ITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDVRRSQL
EQQIQARNQMRMQNAAATGGIPGQFIPPMFYGQQPGFFPPNGRGNGPFPGPNPQMMMPRG
QIPPPQGQWPRPGPNGQPVPVYGMPPVYGGDFNNGANGGRQQRGYYPNRNQNQKGRQQKD
LAAIIANAPADQQKRILGEELYPKIVSTGKAQEPEAAGKITGMMLDLDNEEILALLEDDE
LFNTHFEDALTAFEEYKKSSEAATAEN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccgacgctaaccaagttcaagaatcattggaaaagttgaatcttgattct
gcaccagttgcatccactgaggaaacagaacaaactgctagtggcgaaaccgaagaagct
gctgactccgctcaagtttcagacacttctgcttcattgtacgttggtgaattgaaccca
tcggttaacgaagcattattattcgaaatcttctccccaatcggtcaagttgcctccatt
agagtttgtcgtgatgccgttaccaagaagtcgttaggttacgcttacgtcaacttccac
aagtttgaagacggagaaaaggccattgaagacttgaactactctcttatcgaaggacgt
ccatgccgtattatgtggtcccaaagagacccatccttaagaagaaacggtgatggtaac
attttcatcaagaacttacacccagctattgacaacaaggctttacacgacactttcact
gcttttggtaagattttatcatgtaaggttgccactgatgacatgggtatttccaaatgt
ttcggtttcgtccattacgaaaccgctgaagctgctgaagctgccatcgaaaatgttaac
ggtatgttgttaaacgatcgtgaagtttacgttggtaagcacatcagtaagaaagaccgt
gaatctaagtttgaagaaatgaaggctaacttcactaatgtttacgctaagaacatcgac
ttagacttctccgaagaagaattcaagaaattattcgaagcttacggtaaaattacttct
atctaccttgaaaaggaccacgaaggtaagtccaagggtttcggtttcgttaacttcgaa
aaccacgaatctgcagttaaggctgttgatgaattaaacgacaaggaaatcaacggtcaa
aagatttacgttggtagagctcaaaagaagagagaaagattggaagaattaaagaaacaa
tacgaaaacaccagattagaaaaattatccaaatatcaaggtgtcaatttatttattaag
aacttggatgacacaattgattccgaaaaattagaagaagaattcaagccattcggtagt
atcacctccgcaagagttatggttgatgaaactggtaagtctaagggtttcggtttcgtt
tgtttctcttctccagaagaagccacaaaggccatcactgaaatgaaccaaagaatgatc
tacggtaagccattatacgttgctttagctcaacgtaaagatgttagacgttctcaatta
gaacaacaaattcaagctagaaaccaaatgagaatgcaaaatgctgccgccaccggtggt
attccaggtcaattcattccaccaatgttctacggtcaacaaccaggtttcttcccacca
aacggtagaggtaacggtccattcccaggtccaaacccacaaatgatgatgccaagaggc
caaattccaccacctcaaggccaatggccaagaccaggtccaaacggccaaccagtccca
gtctacggtatgccaccagtctacggtggtgacttcaacaacggtgccaacggtggccgt
caacaaagaggctactacccaaacagaaatcaaaaccaaaagggtcgtcaacaaaaggat
ttagctgccatcattgccaatgctcctgctgaccaacaaaagagaatcttaggtgaagaa
ttatatccaaagatcgtctctaccggtaaggctcaagaacctgaagctgctggtaaaatc
accggtatgatgttagatttggataacgaagaaatcttagctttgttagaagatgatgaa
ttatttaacactcatttcgaagatgctttgaccgcctttgaagaatacaagaaatcttct
gaagctgctactgctgaaaactaa
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