Debaryomyces hansenii: DEHA2G20328g
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Entry
DEHA2G20328g CDS
T01026
Name
(RefSeq) DEHA2G20328p
KO
K18748
protein SSD1
Organism
dha
Debaryomyces hansenii
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2G20328g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
DEHA2G20328g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
2905373
NCBI-ProteinID:
XP_462426
UniProt:
Q6BH95
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All DBs
Position
G:complement(1647133..1651014)
Genome browser
AA seq
1293 aa
AA seq
DB search
MSADNNSGSHNNSSDNLSNPGSSEGAGSKKPRNLHIAHRRSPSELTTLMVEQYNLQRQLE
QVQLQQKQIMQAQQMTQQYSYPSKNSGGNNSGGSNTNTNASELMPPPSNYRSHSRSSSIN
SNSGGSGQGHRRTGSASNQNMGHNRRHSLGLNEAIKAAANQRQTNRTSLSPTGDNSSTSP
KSNDSPKPNDSIGSFKFPPSSGAEGGDNDSSYSGGSSGSAHNRSKSLAYGQQSFKFPPEN
SSLLPPTPNFTINQSPERGHQRRGSHYRSGSRNFDPNGAANMNTNWRSQQQQHQRQQSSQ
LEPPQASFVPGHRPRNSSYGGGSSISSLSQFMPNNNGGGGNGSGRKSLFAPYLPQSSLPE
LINDGRLVTGTLRVNKKNRSDAYVSTDGLLDADIFICGSKDRNRALEGDLVAIELLVVDE
VWDSKKEKEEKKRRKDNTLGKTPTTSIMNDDIHNDATSTSAPTTSGETEDKSEADGDSGL
TRRGSLKQRPTMKKNDDVEVEGQSLLLVEEEEINDEIKPLYAGHVVAVVDRIPGQLFAGT
LGLLRPAQAAQAAKDKKYGKEPSIQQPKAPKIVWFKPTDKKVPLIAIPTEQAPKDFVENH
ERYADQLFVASIKRWPITSLHPFGTLVSKLAKIDDPETEINSILRDNNFLCDEYPEDDDN
GIISSFINDFSSIESELNNIDRTEYLNDYIISFSQNGEFVDHALHVKRLSDTKIEVGFHA
ADIAFYIKPGSVLDRKAKKRSSSVFLPQKITHLFPQQVNNLISFKENERNLALSVVFEID
TTNFEVEDLYIHESIIVPKQIVKYESFDRILDGKQVTNISSATSDYIKTFGLIAKEFRRQ
RLADRDLGITPNLTLLDQLDDEKVNLHLNIFKDSLSFDIVNEISHKVNNAIAAKIHASLG
DQALLRRHSLPTLQKMEAFVRRATNLGFKIDTTNSSTLQRSILKIQDPVKRQCVEILLYK
CMSRGKYYVAGKQDPDSYGHYYFNIPLYTHFTAPLRRYADLIVHRQLKTVLSKADEDRSV
DLDALKATADYCNFKKDCAANAQEQAIHLLLSQTINEISESAGQLLCMGTVIQVYESSFD
VFIPEFGVEKRVHGDQLPLVKAEFDKSSRLLELYWEKGVDSATFIPPDEQSSLSYRSSIK
NKYRTSSLQAAKMQSKTLLEKNNVMSDSIIQKLTKLNLEVPNISIPSINKADLGSRDLNT
RSMPSSPTRSSSFPKNVRTNSSSLIKSDSTNGASDIDALSGLKPYLQDLITRVDSGSYIQ
EIRELTQVPILIRAEIGMALPCLTVRALNPFCE
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgataataacagtggaagccataacaatagctctgataacttgagcaacccg
gggtctagcgagggagctgggtccaagaaaccaagaaacttacatattgcacatagacgt
tcgccaagtgagttgaccacactcatggtagagcaatataatctccagcgccagttggag
caggtgcaattgcaacagaaacagattatgcaagcgcagcagatgacacaacaatatagc
tatccatctaaaaatagcggtggcaataacagtggaggaagcaatacaaacaccaatgct
tctgagttgatgcctccaccctccaactaccgctcgcattcgagatcatcgtcgatcaat
tcgaacagcggcggcagtggccagggccatagaagaacaggatcagcctcgaaccagaat
atgggccacaacagaagacattctttgggattgaatgaagcaatcaaagctgctgcgaac
caaagacaaacaaatagaacatcattgagcccaaccggtgataattcaagtactagtcca
aaatccaatgacagtcctaagcccaatgacagtattggatcgtttaaatttcctccaagt
tcaggtgccgagggcggtgataatgattcttcgtattcaggtgggtcttctggatctgcg
cataatagatctaagtctttagcctacggacagcaatcatttaaatttcctccggaaaat
agctcattattacctccaaccccgaacttcaccatcaatcaaagtccagagagaggtcat
caaagacgtggttctcactatagatctggctccagaaatttcgacccaaatggcgctgcc
aatatgaatacgaactggagatcacaacagcagcaacatcagagacaacagtcgtcacaa
cttgagcctcctcaagcctcatttgtccccggacatagaccgcgtaatagctcgtatggt
ggaggctcatctatttcgtcgttatctcagtttatgccaaataataatgggggaggtgga
aacggaagtggccgtaaatctctctttgctccttacttacctcaatcgtcgttacctgaa
ttaatcaatgacggtcgcttagttactggtacattaagagttaacaaaaagaataggtcg
gatgcttacgtttcaactgatggcttattagatgccgatattttcatttgtggttcaaag
gatcgtaatcgtgctttggagggcgatttagtagccattgaattattggttgtcgatgaa
gtttgggactccaagaaggaaaaagaggagaagaagagaagaaaggacaacaccttaggt
aagactccaaccacttcaataatgaacgatgatattcacaatgacgcaacttccacatca
gcccctacaacaagtggtgaaacagaggacaaatctgaagctgatggagattcaggtttg
acaagaagaggttcattgaaacaaagacctaccatgaagaaaaatgatgatgttgaagtt
gaaggccaatcgttgcttttggttgaagaagaggagatcaacgatgaaatcaagccattg
tacgcaggccatgttgttgcagttgttgatcgtatacctggccaattgtttgctggtacc
ttaggattattgagacctgctcaagcagcacaagcggctaaggataagaagtacggaaaa
gagccatcaatccaacaaccgaaggcacctaaaatcgtctggtttaagccgaccgataag
aaagtacctttaattgctattccaacggaacaggcgccaaaggatttcgtagagaatcac
gagaggtacgctgatcaattatttgttgcttcgattaagaggtggccaatcacctcatta
catccatttggtacattagttagcaaattagccaagattgatgatcctgaaacggaaatc
aattcgattttaagagataacaatttcttatgtgatgaataccccgaagatgatgataat
ggaattataagctcgtttatcaatgatttctcaagtattgaatctgaattaaacaatatc
gacaggacagaatacttgaacgattatattatatcgttttctcaaaatggggaattcgtt
gaccacgcgttgcacgtcaaaagactttcagatactaagattgaagtaggattccatgct
gctgatatcgctttctatatcaaacctggttctgtattagatcgaaaggcaaaaaagaga
tcatcatctgtatttttacctcagaagattactcatttattcccgcaacaagtgaataat
ttgatttccttcaaggagaatgaaagaaacttagcactctcagttgtctttgaaattgac
acaactaactttgaagttgaagatctttacattcatgaatctattattgttcctaaacaa
attgtcaagtatgaatcttttgaccgaattttagatggtaagcaggttactaacatctca
tctgcaacctctgattatatcaaaacttttggcttgattgcgaaagagtttcgtcgtcaa
agattagctgatagggacttaggtatcaccccaaatttgactttattggatcaattagat
gatgaaaaggttaatttacatttgaatattttcaaggatagtctttcttttgacatcgtg
aatgaaatttctcataaagtgaataatgctattgcggcaaagattcatgcaagcctagga
gaccaggctttattacgtcgtcactcattaccgacattacaaaaaatggaggcctttgta
agaagggcaactaatttaggatttaagattgacacaactaattcttcgactttacaaaga
tccatcttaaaaattcaagatcctgttaaaagacaatgtgttgaaatattattgtacaag
tgcatgtcaagaggaaaatactatgtggcggggaagcaagatcctgacagttatggtcat
tattatttcaacattccattatacactcatttcacagctccactaaggagatacgcagac
ctaattgttcatagacaattgaaaacagtactcagcaaagcagatgaagatagatcagta
gatttggatgcattaaaggcaacagctgattactgtaacttcaagaaagattgtgctgct
aatgctcaagaacaggcaatccacttattattatcccaaactattaatgaaatcagtgaa
agtgccggccaattattgtgtatgggtacagtcattcaagtttatgaatcatcattcgat
gtatttattcctgaattcggtgttgagaagagggttcacggtgatcagttaccattagtc
aaggcagagtttgataaatcttctaggctcttggaactttactgggaaaagggtgtcgac
tcggctacatttattccacctgatgaacagtcttctttatcgtacagatcgtccatcaag
aacaaatacagaacctcatcattgcaggcagcaaagatgcaaagcaagactttattggaa
aagaataatgttatgtctgattcaattattcagaaattaaccaaattgaacttggaagtt
ccaaatatatccattccttcgatcaataaagcagatctaggatctagagatttgaacaca
agatcaatgccatcgtcacctactaggtcgtcttctttccccaagaatgtcagaactaat
tcatcatcattgatcaagtcagactccactaatggtgctagtgatatcgacgcattaagt
ggcttgaagccatacttgcaagaccttattaccagggttgacagtggttcgtatattcaa
gagatcagagagttgacacaagttccaatccttattagggctgaaataggtatggcttta
ccttgtttgactgttcgtgctttgaatccattctgtgagtaa
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integrated database retrieval system
