Desulfitobacterium hafniense DCB-2: Dhaf_0006
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Entry
Dhaf_0006 CDS
T00822
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhd03032
]
Dhaf_0006
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_0006
Enzymes [BR:
dhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dhaf_0006
DNA replication proteins [BR:
dhd03032
]
Prokaryotic type
DNA Topoisomerases
Dhaf_0006
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dhaf_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DNA_primase_lrg
Motif
Other DBs
NCBI-ProteinID:
ACL18076
UniProt:
B8FXX1
LinkDB
All DBs
Position
6274..8760
Genome browser
AA seq
828 aa
AA seq
DB search
MSTEIQGGKILPIEISEELKKSFIDYSMSVIVSRALPDVRDGLKPVHRRIIYTLHELGMT
PNKPYSKSARLVGDCMGKFHPHGDSSIYDAVVRLAQDFSTRYPLIDGHGNFGSVDGDSAA
AMRYTEARMAKITQYMLADIDKDTVDFQPNYDEREQEPKVMPAKFPNLLVNGSAGIAVGM
ATNIPPHNLTEVIEGTIAQIDNPEIEIKELMNYIKGPDFPTGASIMGTEGIISAYRTGKG
SFRTRAKAHVEEMEKSGKMRIIVTEIPYMVNKARLVEKIAELVREKRIEGITDLRDESDR
TGMRIVMELRRDVNPQVLLNQLYKHTQMEESFGVNILALVDGQPKVLNLKQIIHYFIEHQ
KDVIVRRTRFELNKAEAEAHILEGLRIALDYIDEVISIIRTSADEQSAKDNLMSRFGLSD
KQSQAIVDMRLKRLTGLEREKIEEQYQKIQETIAYLKAVLNSEQMVLNIIKQELQEVKEK
FGDERRTEISFDATHMNIEDLIDDEEVVITMSHRGYIKRMPLNTYKSQRRGGKGVHGMAT
REEDFVEKIFTTSTHQYILFFTTRGKVYRLKAHEIPEAGRTGKGTALVNLLSINPSEEKI
TAVLSIRKYNEDFHLFMATRKGIVKKTLLKEYDSPRKDGLIAISLSGDDELIDVRLTKPD
EHIIIATKNGLCIRFLESDVRQMGRTAHGVKGISLEKEDLVVSMDVIYEEEAEILSMTEL
GFSKRTSLSEYRVQGRGGKGIIATKLNAKTGKLVGLKVMRPENDMMIITEDGIIIRQEVS
GISKQGRSAQGVMAMRIGESKVVAIAVVDNKEDAEESDLELVEIESEE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaaattcagggaggaaagattctccctatcgaaatatcggaggaactaaaa
aaatcctttatcgattattccatgagtgttatcgtcagccgggctttgccggatgtacgg
gatggtttaaaaccggttcatcgccgcattatctacaccttgcatgaattggggatgact
cctaataagccttacagcaaatccgcccgtctggtaggggattgcatggggaaattccac
ccccatggggattcctccatctatgatgcggtggttcgcttggctcaggatttttccacc
cgttatcccttgatcgacggacatggcaactttggctcggttgacggtgactcagctgcg
gccatgcgttatacggaagcaagaatggctaaaatcactcaatatatgctggccgatatc
gataaggataccgtggattttcagcccaactatgatgagcgggaacaagagcccaaggtg
atgccggccaaattccccaatctcttggtcaacggttcggcgggcattgcggtggggatg
gctaccaatatccctccccataatctcaccgaagtgattgaaggaacgattgctcagatc
gataatcccgagatcgagatcaaagaactgatgaactatatcaagggacctgattttcct
accggcgcctccattatgggaacggaagggattatctcggcttaccggaccggtaaaggc
agctttaggacccgtgccaaagcccatgttgaggagatggagaaatccggcaaaatgcgg
attatcgtgaccgagattccttatatggtgaataaggcccgcttggttgaaaaaattgct
gaattggttcgggagaaaaggatcgaaggcattacggatctccgggatgaatcggaccgg
accgggatgcggattgtcatggaactgcgccgggacgtcaatcctcaggtccttctcaat
cagctctataagcatactcagatggaagaaagcttcggggttaatattttagccttagtg
gacggtcagcctaaagttctcaatcttaaacaaatcattcattactttattgaacaccaa
aaagatgtgattgtgcgcagaacccgctttgagctgaataaagccgaagctgaagcccat
attttagagggcttgagaatagccctggattatatcgatgaagtgatcagtattatccgg
acttccgctgatgagcagagcgccaaggataacttaatgtcccgtttcggactgagcgat
aagcagtctcaggccattgtggatatgcgcctgaagcggctgaccggcttggaacgtgag
aagatcgaagagcagtatcaaaaaattcaggagaccattgcttatttaaaagcagttctc
aattcagagcaaatggtgctcaatattattaagcaggaactgcaagaggtcaaagaaaaa
ttcggcgatgaacggcgcacggaaatttcctttgatgccacccatatgaacatcgaggat
ctaatcgatgatgaagaagtggtcatcaccatgtcccacagggggtatatcaagagaatg
cctctgaatacctacaaaagccagcggcgcgggggtaaaggagttcatggcatggccacc
cgggaagaggatttcgtggagaagatctttaccacctccacccatcaatatattctcttc
tttaccacccggggcaaggtgtatcgcttaaaggctcatgaaattcccgaagcaggccgg
acaggaaaaggaacggcacttgtcaatctcctgagtatcaatcccagtgaagaaaagatc
accgccgttttgtccatcagaaagtataatgaggattttcatctctttatggctaccagg
aaggggattgtcaagaagaccctgctcaaggagtatgactcaccccgcaaggatggcttg
attgctatcagcttaagcggtgatgatgaactgattgacgtccgtttaaccaagcctgat
gagcatatcatcatagcgactaaaaatggtttatgtattcgcttcctggagtctgatgta
cgtcaaatgggcagaaccgctcatggagtcaaagggatttctttggaaaaagaggatctt
gtggtgagtatggatgtaatctatgaggaagaagcggaaatactatccatgaccgagctg
ggcttctccaagcggaccagtctctccgagtatagagtgcaaggacggggcggcaagggc
atcattgccaccaagctcaatgctaaaacaggtaaactggtggggctgaaggtgatgaga
cctgaaaacgatatgatgatcatcactgaagacggaattattatccgccaggaagtgtcc
ggcatttccaaacaaggccgttcagcccagggagttatggccatgagaatcggtgaaagc
aaagtggtggccattgccgtcgttgacaataaagaagatgctgaggaatcagatttagaa
ttagtagaaatagaatctgaggaataa
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