Desulfitobacterium hafniense DCB-2: Dhaf_0464
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Entry
Dhaf_0464 CDS
T00822
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dhd03000
]
Dhaf_0464
Transcription factors [BR:
dhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dhaf_0464
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
PAS_8
HTH_28
AAA_2
GAF
dCache_1
Bac_DnaA
PAS
Motif
Other DBs
NCBI-ProteinID:
ACL18531
UniProt:
B8G208
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All DBs
Position
497594..499561
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AA seq
655 aa
AA seq
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MRLHDCLKLVRAEGIDPAYFPKIKDEWQRFLAGEKVNKQMVPSEVIESWERSRSYGIDPY
GTDPHPVNLSGKEYKNLQEILNRYGFFFERIVELVEQDDLTLYLNTADGLNYHLFRSGGM
SGHASLGHCNEKTVGTTASCLAKLYNQPILLVHPYRYSQNYTQNHGVSAPIHNEKNEVIG
ALGLGFEDPRFCIQAYSMISFIAQAFDSLYLPLTNGYEKHIQKIIDCMPHGVAFVDERDT
VQLYNNKILELLKIRRKNNIESELNKHLARLGVGAGFKDKQEAAVTCAEIQVDNEKPYKL
ILLKDRLEGRKPGISPSPEGEGKGLFTFDQIIGESTLLKEAKKVAANVARTSVPVMIHGE
SGTGKEMFAQAMHCASPRRNGPFVAINCGALPGELVESELFGYEEGSFTGALKGGRIGKV
EAASGGTLFLDEIESMPLKDQIKLLRVLSTGKVQKIGSTKEIQVDVRIVAATKIDLLKHA
DDGLFREDLFYRISTFIIELPALRQRKEDIGALAEYFIKKLASKYDRGKIKMDPVFVDAL
QRYYWRGNVRELEHAMERAIIMLEDGETLMLEHLSPGIQQAYRKRTVEKLVAETVQTTSH
RQGLLELAERRVIEYVLELVDGNQSLAAQQLGINRRTLYTKLNGKSNSGREVLDA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcacgattgtttgaagttagtgagggcggaagggattgatcccgcatacttc
ccgaagattaaggatgaatggcagcgctttttagcgggggaaaaggttaataagcaaatg
gttccgagcgaagtgattgaatcatgggagcggagcagaagctatgggatcgatccctat
gggacagacccccatccggtcaatctctcaggaaaagaatataaaaatttacaggagatt
ttaaacagatacgggttcttttttgagcggatagtggaactcgtggagcaggacgatctt
accctataccttaatactgctgatggtttaaactatcatctgtttcgcagtggtggaatg
tccggtcatgcttccttgggacattgcaatgagaaaaccgtaggtaccaccgccagttgc
cttgcaaaactttataatcagcccatccttctggttcacccttatcggtacagtcaaaac
tatactcagaatcatggtgtttcggctccgattcataatgaaaagaatgaagtcatcgga
gctttgggtttaggatttgaagatccccgattttgcattcaggcttatagtatgatcagc
tttatcgcccaggcttttgatagcttgtacctgcctttgacaaatgggtatgagaagcat
atccaaaagattattgattgtatgccccatggagttgcctttgtggatgagcgggatacg
gttcagctttataacaataaaattttggaactattgaagattaggcgcaagaacaatata
gagagcgaattaaacaagcatctggcaaggttgggtgtcggagcaggttttaaggataag
caagaagctgcggttacttgtgcagaaattcaggtggataatgaaaaaccttataagctt
atcttgcttaaagacaggctggagggcagaaagcctggaatttctccatctccggaaggg
gaaggaaaagggctgtttacctttgaccagattattggggaaagtaccctccttaaggaa
gccaaaaaggttgctgccaatgtagccaggacttcggtaccggttatgattcatggcgag
agcggcacaggtaaggaaatgtttgctcaagccatgcattgtgccagtcctcgccgcaac
ggacctttcgtggcgattaactgcggggccctccccggggagctggtggaaagtgagttg
ttcggttatgaagaaggctcttttaccggtgctctgaagggaggcaggatcggtaaggta
gaagcggcttcaggaggaaccctcttcctggatgagatcgaaagcatgccccttaaggat
caaatcaaactcctgcgtgtgctctccactgggaaagtgcagaagatcggcagcaccaaa
gaaatccaagtggatgtccgcatcgtggcggccaccaagatcgatctgctgaagcatgcc
gatgatggtttattccgtgaggatttattctaccggatcagtacctttattattgagctg
ccggccttaaggcagcgcaaggaagacattggagctttggccgagtattttattaagaag
cttgcctcaaaatacgatcggggtaagattaaaatggatccagtgttcgtcgatgcgctg
cagaggtattattggcggggcaatgtccgggaactggagcatgctatggagcgggcgatc
attatgctggaggatggagagactctcatgctggagcatctatctccgggcatacagcaa
gcttataggaaaagaactgtggaaaaattagtggcagagacagtccagacgacctcccat
cgccaaggtttgctggaattggctgagagaagggtcattgagtatgtcctggagctggtg
gatgggaaccaaagtctggctgcccaacagctgggaatcaatcgcaggaccctctacacg
aagctcaatggtaaatccaattccggcagagaggtattggatgcataa
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