Desulfitobacterium hafniense DCB-2: Dhaf_0531
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Entry
Dhaf_0531 CDS
T00822
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dhd03000
]
Dhaf_0531
Transcription factors [BR:
dhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dhaf_0531
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
Mg_chelatase
HTH_8
AAA_5
HTH_50
AAA_2
AAA
AAA_3
HTH_23
HTH_22
HTH_17
HTH_7
AAA_19
HTH_28
HTH_29
PAS
HTH_Tnp_ISL3
HTH_11
TIP49
AAA_16
MCM
Sigma70_r4_2
DUF815
Motif
Other DBs
NCBI-ProteinID:
ACL18598
UniProt:
B8FUV2
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All DBs
Position
584905..587004
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AA seq
699 aa
AA seq
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MQSKSFNLKKFDDVLNQMIVPNLQQAPLWDVDNRPMTKDRWETTVRCKKSLLDGDLDAVM
TSEYPRAEIKKVWIESYKLGLRPSDKTHDPEEDMLRNENLMPFAQIVFPTIHDLGDFNKI
PIFMNIHDRQGTFFFQKTESGIESYFVQEFLFSNEPREIRKSGLTSHLLCKRSMCPAVLL
GPEHYLESDLNINSASAPIFDVSGNLDAIITLAYRETGIPWEKDTAEKVSTILTQVLLLA
HRIQTSIRPPAERDIPVGREEIPCPDLINDPPIIVVDPAGTIIGINPAGRRFFPTLPTDG
QAGNIRRYLPANSKLLPLIQTQAQTIITEVICSPPATGLYSVQIRPFEAAGRSCSILLFS
NAKESGQATAPGKCSPAADCFNSLIGESHAFRNAIDQAVCFANSNGNILLTGESGTGKEL
FAKAIHNCQDKKGPFVAINCAAIPRELISSELFGYASGSFTGGDRKGRKGKIEMADGGTL
FLDEIGDMPYELQAVLLRVLQDKQVTRIGDHVSHQIEFNLITATNRNLKDLMESGQFRPD
LFYRISMFPINIPPLRDRKGDIKLLVSYFMNSCGQNNPESLSISNEALQILEEYDWPGNV
RQLENVILYMMTIAKSRNCKVLLPEHIPNIVIQSSPPSLAPGEAPDTEKADAYGTIHHVE
KVMLEKMLKEFNHDIPLVAEILGVSKSTVYRKIKRYNLA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgaagtcgtttaacctaaaaaaattcgatgacgtactgaaccaaatgatcgtt
cccaatcttcagcaagctcccctgtgggatgtggacaaccgacctatgaccaaagaccgt
tgggagaccaccgttcgctgtaagaagtccctgctggacggggacctcgatgccgtaatg
acctctgaatatccgcgcgccgagattaaaaaggtttggatcgaatcctataagctgggc
ttacggccgtcagataaaacccatgatccggaggaggatatgctgagaaacgaaaatctc
atgccctttgcccagattgtctttccgacgatccatgacctcggagatttcaataagatc
cccatctttatgaacattcacgaccggcagggtacgttcttttttcaaaaaacagaaagc
ggtatcgagtcttattttgttcaggagtttctttttagcaatgaacccagagaaatccgc
aagagcggactgacttcccatctgctctgtaaacgctccatgtgtccggcagtactgctg
ggaccggagcattatctggagagcgacctcaatatcaacagtgcttccgcaccgattttt
gacgtgagcggcaatctcgatgccatcattaccctggcttaccgggaaacgggaattccc
tgggaaaaagataccgcggagaaagtgtccaccatcctgactcaagtgctgttgttggca
caccggattcagaccagtatccgcccccctgccgagagagacatccctgttggccgggaa
gaaatcccttgccccgacctgatcaacgatccccccattattgtcgtcgacccggcagga
acgatcatcggcattaatccggcaggccgccgcttttttcccaccctgccgaccgatggt
caagccggcaatattagaaggtatcttcctgccaattccaaactccttccccttatccaa
acccaggcacaaacgatcattaccgaagtgatttgttccccgccggccaccggcctttat
tctgttcagatcaggccttttgaagcggcaggcagatcctgttcgatcctgcttttttcc
aatgccaaagagtccggccaagctacggctccgggcaaatgctcaccggctgccgactgt
ttcaacagtttgattggcgagagtcatgctttccgcaacgccattgatcaggctgtgtgt
ttcgccaactcaaatggaaatatcctgctgaccggggaaagcggtaccggcaaagaattg
tttgccaaagccattcacaactgtcaggataaaaaagggccgtttgtggccatcaactgt
gcggcaatccctcgtgagctgatcagcagtgaactgtttggttatgcttccggttctttt
accggcggggacaggaaagggcggaagggaaaaatcgaaatggctgatgggggtacgtta
tttttggatgaaatcggcgatatgccctatgaacttcaagctgtcttattgcgtgttctc
caggacaagcaggtaacgcggatcggcgatcacgtctcccatcaaattgaattcaatttg
atcacggccaccaaccgtaaccttaaggatttgatggagagcggtcagtttcgccccgac
ctcttctacagaatctccatgttccccatcaacatcccgccgttacgggaccgaaagggg
gatatcaagctgcttgtctcctatttcatgaacagctgcgggcaaaacaatccggagtct
ctgtccatctccaatgaagcgctccagatcctggaggaatacgattggccaggcaatgta
cggcaactggagaatgtaatcctgtatatgatgacgatagccaaaagccggaattgcaag
gttctcctgccggaacatatcccgaatattgtcatccagtcatctccaccgtcccttgcg
ccgggagaagctccagatactgaaaaggcggatgcttatggcacgattcatcatgtggaa
aaagtcatgctggaaaaaatgctgaaagaatttaatcatgatattccgttagtggctgaa
atattaggggtaagcaaatcaacagtctaccgcaagattaaaagatataatctggcctaa
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