Desulfitobacterium hafniense DCB-2: Dhaf_0719
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Entry
Dhaf_0719 CDS
T00822
Name
(GenBank) chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dhaf_0719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhd03019
]
Dhaf_0719
03110 Chaperones and folding catalysts [BR:
dhd03110
]
Dhaf_0719
03029 Mitochondrial biogenesis [BR:
dhd03029
]
Dhaf_0719
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dhd04147
]
Dhaf_0719
Enzymes [BR:
dhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Dhaf_0719
Messenger RNA biogenesis [BR:
dhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Dhaf_0719
Chaperones and folding catalysts [BR:
dhd03110
]
Heat shock proteins
HSP60 / Chaperonin
Dhaf_0719
Mitochondrial biogenesis [BR:
dhd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Dhaf_0719
Exosome [BR:
dhd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Dhaf_0719
Exosomal proteins of other body fluids (saliva and urine)
Dhaf_0719
Exosomal proteins of breast cancer cells
Dhaf_0719
Exosomal proteins of colorectal cancer cells
Dhaf_0719
Exosomal proteins of bladder cancer cells
Dhaf_0719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACL18783
UniProt:
B8FVZ7
LinkDB
All DBs
Position
806107..807678
Genome browser
AA seq
523 aa
AA seq
DB search
MERVSLCGEKARQALIEGINSVADCVRITLGPKGRNVVLEPLVGRPKITNDGASIAGIIS
VPNRFHNLGCQIIREAAEKTNDLAGDGTTTAVVLAQAMIEEGMKQIAAGLNPVCLIKGLE
RGAAAVVEAVRVQAVKVTELEQVAQVGAISSGDPALGKLLAEAVGKVGFQGIITIEEGKG
LQPYLEIKHGISFNKGCFTPKIVKSWERKSEALTDAFILIVDGRLSTADEIFAVLQLTVK
YEKPLLLIAEDIGIDLLALLLANKQKGTMNAVAVQSPGSGERRKEYLQDIAILTGGTVIG
EENGIILEEVTEEHLGRAGKILADNNSTTIIGGMGDPRQISLRCSQVRREYEGRLPGWRR
GKLAERLGWLQGGVAVVYTGAPTRLELQEQKDRLEDAVNSVRVAVSEGIVPGGGTALLEA
RRSLSKLGCKEKESEAGLHILYKALEAPLRRIVINAGGDPDAVLETIEELPQGHGYHAAE
NRFVDMLESGISDPVQVTCAALRSAVSIATLVIGTGGVVIRGQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggtttctttatgcggagagaaagccagacaggcacttatcgaaggaataaac
agcgttgccgactgtgtcagaatcaccctgggccccaagggcaggaacgtggttctggag
ccgctggtgggacggccgaaaattaccaatgacggggccagcatcgcgggaatcatctca
gttccgaaccggtttcataatctcggctgtcagattatccgggaagctgcggagaagacc
aatgatctggccggagacgggacgaccactgctgtcgttttggcccaggccatgattgaa
gaagggatgaagcagatcgctgccggacttaatccggtctgcctgattaagggtctggag
cggggagccgcagcggtggttgaggccgtgcgggtgcaggctgtcaaagtgacagaactt
gagcaggtagctcaggtgggcgccatttcctccggcgatccggctcttggaaaactgctg
gccgaggcggtgggtaaggttggttttcagggcatcatcaccattgaggaagggaaaggg
ctgcagccctatttggaaattaaacacggcatttcctttaataaaggctgcttcaccccg
aaaatcgtaaaatcctgggagcggaaatcggaagccctgacggatgcttttatcctgatt
gtggatgggcggctcagcaccgccgatgaaatttttgccgtgctgcagctgactgttaaa
tatgagaagccactgctgctcattgccgaagatattggcatagacttgctggccttgctg
ctggccaataagcaaaagggaaccatgaacgccgtcgccgttcagtctccgggctccggg
gaacgccgcaaggaatatctgcaggacattgccatactgactggcggtacggtgatcggt
gaagaaaacggaatcattttggaagaagtgacagaagagcatttgggccgggccgggaag
attctggctgacaataacagcaccacaatcatcggcggaatgggcgacccccggcaaatc
agcctgcgctgcagccaggtccgccgggaatatgaggggcggttgccggggtggcgcagg
ggcaagctggcggaacggctgggctggctgcagggcggtgtagccgtggtttacaccgga
gcgcctacccggctggagcttcaggagcaaaaagaccggctggaggatgcggtgaactcc
gtacgggtggccgtcagcgaagggattgtaccggggggtggaaccgctttgctggaagca
agacggtcactgtccaagcttgggtgcaaagaaaaagagagcgaagcagggctgcacatt
ctttacaaggctttggaagctccgctgcgccggattgtcatcaatgctgggggcgatcct
gatgccgtgttggaaaccattgaggaactgcctcaaggtcatggctatcatgcggctgag
aaccggtttgtcgacatgctggagagtgggatcagcgacccggtccaggtgacctgtgcc
gcgctgagaagtgcggtttccattgccactctggtgatcggcacaggaggcgtggttatc
cgcggtcaatag
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