Desulfitobacterium hafniense DCB-2: Dhaf_1014
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Entry
Dhaf_1014 CDS
T00822
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dhd03000
]
Dhaf_1014
Transcription factors [BR:
dhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dhaf_1014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_3
HTH_30
PAS
HTH_50
AAA_16
IstB_IS21
HTH_7
Zeta_toxin
AAA_7
TIP49
DUF815
HTH_28
Mga
GAF
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ACL19074
UniProt:
B8FYI7
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All DBs
Position
complement(1105888..1107825)
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AA seq
645 aa
AA seq
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MHYTQEEILEAWKNFIVRGVSQEDKVHPSVARSWERCRKLGLDPWSTEFPKCDPSLLQKK
RTQYAELLSLAAPVMNYLYTLLDCNISICDSDGFVFELITPLKNYPRTLGAYTDEATCGN
GAVTIALKEKIPMRTDGYEHYRIISQNHSGVSSPIMIDNALVAVLNGVNPFGSLHDKALA
MTITAAKLIEYCLMAGPKPAKPLELRPRIKTMIDDCSSPVLVLEHDGTIYTANHVFASSL
AGSDTTGKSLGNYLADKHDLNRLLANNYEQPSEEIEFKTNFTPHKRETFRCRLLRKRQIR
LLSGEVHTLLIFKKQGPVSIPHKLSKPHGIDYIGESTAWSKVDSIVQKTAKFPSNVLLLG
ETGTGKEVVAKAIHQRSGRKGNFVAINCGALPKDLLHSELFGYEEGAFTGARAHGSIGKF
EHAHEGTLLLDEIGEMPLDMQVTLLRFLQERTITRINSNKPKKVDVRIIAATNKDMAELV
RLGQFRQDLYYRLNVIEINLPPLHERKCDIPLLAEYFISELSRQYNVPSKQIHPAALQIL
CGYSWPGNVRELKNVIEKALILSEGLEITPDFLPEYILPSQNATSQSIPSTSRIGESERE
HIINLLESYNGNIFQTAKALKMSRNTLYRKIEKYNIQLKTSAVKK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcattatacccaggaagaaattcttgaggcttggaagaactttatagtccgcggagtg
agccaggaagacaaagttcatccttctgtggcccgctcatgggaacgatgccggaagctt
ggccttgatccctggtcaacggaatttcctaaatgcgacccctccttgttgcagaaaaaa
agaacccaatatgcagaattactgtctttagcggctccggttatgaactatctttatact
ttgctggattgcaacatcagcatctgcgattctgatgggtttgtttttgagttgattacc
ccgttaaaaaactacccccggactttaggagcctataccgatgaagcgacttgtggtaac
ggcgctgtcactatcgccctaaaggaaaaaatccccatgagaaccgacggctatgagcat
taccgcattatcagtcagaaccattccggtgtgagttctccgattatgatcgacaatgca
ttggttgccgtcctcaatggggtcaatccctttggcagccttcacgataaagcccttgcc
atgactatcactgcagctaaactcatcgaatattgtctgatggcagggcctaaacccgct
aaacctcttgaactcagacctcggatcaaaacaatgatcgatgattgttccagcccggtt
cttgttctggagcatgatgggacaatctatacagccaaccatgttttcgcaagctctttg
gccggttccgacacaaccggcaagtctttagggaactatcttgctgacaaacatgatttg
aatcgtctcctcgccaacaattacgaacaacccagtgaagaaattgagtttaaaacaaat
ttcacaccccataaaagagaaaccttccgctgccggctgctcagaaaacggcagattcgg
cttcttagcggtgaagtccataccctgcttatttttaaaaagcaaggccccgtttctatt
ccccataagctctccaaacctcatgggattgactatatcggtgaaagcaccgcttggtcc
aaggtagacagcatcgttcaaaaaaccgccaaattcccatccaatgtgttgctgttgggg
gaaaccgggacaggcaaagaagtggtggctaaagccatccatcaacgcagtggacggaaa
ggcaattttgtagctatcaattgcggagcactgcccaaggatttgcttcatagtgaactt
tttggctatgaagaaggggcttttaccggtgctcgtgcccatggttccatcggaaaattc
gagcatgctcatgaaggaaccctgcttctggacgaaataggagaaatgcccctggacatg
caggtaactctcctgagattcctccaggaacggaccatcacgcggataaactccaataag
cccaaaaaagtggatgtgcgcattatcgccgcaaccaataaagatatggcagagctggtc
agactggggcaattccgtcaggatctctattatcggctcaacgtcattgagatcaacctg
ccgccgctccatgaacgaaagtgcgatattcctttattggcggaatattttatatccgaa
ttatccaggcagtataatgttccatccaaacaaattcatccggctgctctgcaaatcctt
tgcggctacagttggccgggaaatgtcagagagttaaaaaacgtcattgaaaaagcgttg
atcttgtccgaaggcctagaaattactcccgactttttacctgaatatattttgccttct
caaaatgcgacctctcaatccataccatctacttcccgaatcggggaatcagaacgggaa
cacatcatcaacctgctggaaagctataacggcaatatctttcaaacggcaaaagcctta
aagatgtcccgcaacaccttgtaccgcaaaattgaaaaatacaatattcaactaaaaact
tcagcagtgaaaaagtaa
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