Desulfitobacterium hafniense DCB-2: Dhaf_1406
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Entry
Dhaf_1406 CDS
T00822
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dhaf_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhd03019
]
Dhaf_1406
03110 Chaperones and folding catalysts [BR:
dhd03110
]
Dhaf_1406
03029 Mitochondrial biogenesis [BR:
dhd03029
]
Dhaf_1406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dhd04147
]
Dhaf_1406
Enzymes [BR:
dhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Dhaf_1406
Messenger RNA biogenesis [BR:
dhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Dhaf_1406
Chaperones and folding catalysts [BR:
dhd03110
]
Heat shock proteins
HSP60 / Chaperonin
Dhaf_1406
Mitochondrial biogenesis [BR:
dhd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Dhaf_1406
Exosome [BR:
dhd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Dhaf_1406
Exosomal proteins of other body fluids (saliva and urine)
Dhaf_1406
Exosomal proteins of breast cancer cells
Dhaf_1406
Exosomal proteins of colorectal cancer cells
Dhaf_1406
Exosomal proteins of bladder cancer cells
Dhaf_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fe-ADH
EAD9
VP4_helical
Motif
Other DBs
NCBI-ProteinID:
ACL19462
UniProt:
B8FNT7
LinkDB
All DBs
Position
1512641..1514275
Genome browser
AA seq
544 aa
AA seq
DB search
MAKQIVFNEEARRALERGVNALAESVRVTLGPKGRNVVLDKKFGAPLITNDGVTIAREIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVAAGANPMGIKRGIE
KAVESVVEDIKTNAKPIESKESIAQVASISAGDDNIGVLISDAMEKVGKDGVITVEEAKG
MTTELKVVEGMQFDRGYLSAYMITDTDKMEAILNDPYILITDKKIGAIADILPVLEKVVQ
AGRQLLIIAEDIEGEALATLILNKLRGTFTCVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDLGLKLENTTIDMLGRARQIRVTKEETTIVEGSGSQDDIKSRVEAIKKQIDETTSDFDR
EKLQERLAKLAGGVAVIQVGAATEVEMKEKKLRIEDALAATRAAVEEGIVAGGGCALVDA
AKALDSLKLTGDEKTGVAIVCRALEEPLRQIANNAGFEGSIVVEKVRNGGRGVGFNALTE
AYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTECLVSDIPSKDNGAAAMAGMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacaaatcgttttcaatgaagaagctcgccgcgcattagagcgtggtgttaat
gccctggctgagtctgtccgggtaactcttggacctaaaggccgtaatgtggttttggac
aaaaaattcggcgctcctttgattaccaatgatggtgtgactatcgcccgggaaattgag
ctggaagatccattcgagaatatgggggcccaacttgtcaaggaggttgcaaccaaaacc
aatgatgtagcaggggatggaaccaccactgcaactgtattggcccaagcgattatccgt
gaaggcttaaagaatgtagctgccggtgctaatcctatgggcatcaagcgaggcattgag
aaggctgttgaatctgttgtcgaggatattaaaaccaatgcaaagcccattgaaagcaag
gaatccatcgctcaagtagcttctatctccgccggcgatgacaacatcggcgttctgatt
tctgatgctatggaaaaggtcggcaaagacggcgtaatcaccgtagaagaagctaaagga
atgaccaccgagctcaaagttgtcgaaggtatgcaatttgaccggggctatctctctgca
tatatgatcaccgatactgataagatggaagctattttaaatgatccttacatcttaatt
accgataaaaagattggcgctatcgccgacattctccctgttcttgagaaagtcgttcaa
gccggccgtcaacttctgattattgccgaagatatcgaaggggaagctttggctaccctc
attctcaacaaactccgcggaacctttacctgcgttgctgtaaaagctcctggcttcggt
gatcgccgtaaggcaatgctggaagatatcgcaatcctcaccggtggtaccgtcattacc
gaagatcttggcttaaagctggaaaacactacgattgatatgctgggccgtgctcgtcaa
attcgcgtaactaaagaagaaaccaccattgttgaaggctccggttctcaagatgatatt
aagagccgtgtggaagccattaaaaagcaaatcgacgaaacgacttctgatttcgaccgg
gaaaaacttcaagagcgtttggctaaattagccggcggggttgctgtgattcaagtaggt
gctgcaacagaagttgaaatgaaagaaaagaaactccgcattgaagatgctttagctgca
acccgtgcagcagttgaagaaggtatcgtagccggtggtggctgcgcgttagtggatgct
gctaaagcgcttgacagccttaagctgaccggagacgaaaagaccggtgtagctattgta
tgccgtgctttggaggaacctctccgtcaaattgccaataatgcaggatttgaaggctcc
atcgttgtggagaaggttcgcaatggcggccgtggggtaggattcaacgctctgaccgaa
gcatatgaagatatgattgcagccggtatcgttgaccccgctaaagtgacacgttctgcc
ctgcagaatgcagcttccatcgctgctatgctccttactaccgagtgcttagtttccgat
atcccatcaaaggataatggtgcggctgctatggctggtatgggcggcatgggtggaatg
ggcggcatgatgtaa
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